Gene Memar_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1875 
Symbol 
ID4846218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1870783 
End bp1871691 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content72% 
IMG OID640116581 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_001047783 
Protein GI126179818 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGAAGC GGTTCAATAT CGACCTGCTG AGAGCGGATA AGAATGTCGA CGGCCTGATC 
GAAGCGCTCC GGAGCAGCGA CGGCCTGACC CGCCAGCGGG CCGCCCTGGC GCTCGGGGAC
TTCGGCGGTG GTGAAGCGGT CGGGCCGCTC GTCCGGGCGC TCGGCGATCC GCTGACGGCG
GTGCGGGAGG CGGCGGCGGA CTCGCTCACG CTGCTCGGGA CGCCGGCGGT CGAACCGCTG
GCCGAACTCC TCGAGAACCT GGAGGCGTCG GGGAAGTACG GGGAGGAGGA GGCCGTGAGC
CCGCCGACCG TGACCGGGCC CGGCGGCCAG ACCTGGGAAA TCGAGACGCA AAGAGACCTC
CGGCGGGTCT ACGCGGCTGC CATCCTTGGC GAGATCGGTG ATCCCGCCGC GTTAGAACCC
CTCGCCCGGG CGCTCCGCGA CGAGAACGAC GACCTCCGGT GCCAGGCAGC GGGAGCCATA
GCGAAGTTCG GTCCGGGGGC GGTGGAGCCG CTTCGCCGGA TGCTTGCCGA CCCGGACCCG
GACGTCAGGA TCTTCGCGGC CGGCGTCCTC GGGGATACCG GGGAGGCGTC CGCGGTCGAG
CCCCTCATCG GGGCGCTCCG GGACGGCAAC GACGACGTCC GGGGCGCGGC GGCGGGCGCC
CTCATGCGGA TGGGCGGTGC CGCGGTCGAG CCCCTCGTCG CGGCGACGAA GGATGCCGAC
CGGAACGTCC GGCTCTACGC GGCGGGAGCG CTCAAGTACA TCGGCGACCC GCGGGCGATC
GACGCCCTCG AGGCTCTCGC CCGGAGCGGG GACAAGGATG AGAGAAGCGT CGCGGAGGAC
GCGATCGAGA AGATCCGGAT GGTCCGCGGG GAGGTTGCCC CGGAGCCGTC GGCGCCGACG
TCGCGGTAA
 
Protein sequence
MGKRFNIDLL RADKNVDGLI EALRSSDGLT RQRAALALGD FGGGEAVGPL VRALGDPLTA 
VREAAADSLT LLGTPAVEPL AELLENLEAS GKYGEEEAVS PPTVTGPGGQ TWEIETQRDL
RRVYAAAILG EIGDPAALEP LARALRDEND DLRCQAAGAI AKFGPGAVEP LRRMLADPDP
DVRIFAAGVL GDTGEASAVE PLIGALRDGN DDVRGAAAGA LMRMGGAAVE PLVAATKDAD
RNVRLYAAGA LKYIGDPRAI DALEALARSG DKDERSVAED AIEKIRMVRG EVAPEPSAPT
SR