Gene Memar_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1871 
Symbol 
ID4846474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1865950 
End bp1866903 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content65% 
IMG OID640116577 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001047779 
Protein GI126179814 
COG category[R] General function prediction only 
COG ID[COG3481] Predicted HD-superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGAGA AGGCAACCTT CGTGGAGGAG ATCAACGGGG GCGTGCAAGT CGACGCGCCG 
TTCGTGGTGG AAACCGCAGA ACTCCGCGAG AAGCGGGGCG GCAAGTATAT CCAGCTCGCC
ATCTCCGATA AGACCGGCCG GGGAACCTGC AAGGTCTGGG GGACGCCGGA TCACAGCGTG
GAGCAGATCG AGGCGTTCTG CCGCGCGATC CGGCCGGGCG AGATCTACCG CATTCAGGGC
TACGCGAAGG TCTTCAACGG CGCCTGCGAG GTCAACGTGA ACGACGGGAT CACCTGCCTC
GTCGACCCGG TGCCGCAGGA CAGGGTCGAG CCGTCCCTGT TCGTTTATGC GCCCGTCGAT
ATCGAAAGCG TCCGGTTGGG GCTCGCCCGT ATGGCCGCGA AGATCGAGGA GCCCGGCATA
TCCACCCTCA TCTCAATGGT CATGAACGAC GCCCCGGGTT TCCTCGACGC TCCCGCAGCG
AAATTCCACC ACCATGCCTA CATCGGCGGG CTTGCGGAGC ACACCCTCGA GACCGCGGAG
ATTGCGCTCT CTCTTTCGGG CACGGTCTCG CGGGCGGAGA TGGATACCGA CGTCCTCCTC
GCCGGTGCGC TCCTCCACGA TATCGGGAAG GCGACCTGCT TTTGCCGCCG AGGGTTCTCG
TTCGTCCCGC TCCCGGAATA CACCCTCGTC GGGCATACGG CGATCGGGGC TGCGGCGCTC
ATGAAGCATT CCGCCGGTGT CGACCCTGCA CGGTTCGGCC ACATCCTCCA TATCGTGATG
TCGCACCACG GCCCCCACGG GGATGTCCAG CCCCGGACAC CCGAAGCCTG GGCGGTTCAC
TTCGCCGACA ACGCAAGCGC CTTCCTCCGG GAAGTCTCGG ACGACGCCGC GGATCTTGCA
CCGGGAGAGG GGCGGCAGGG GGCACTGAGC GGGAAGGCGG TCTACCGGTT CTGA
 
Protein sequence
MFEKATFVEE INGGVQVDAP FVVETAELRE KRGGKYIQLA ISDKTGRGTC KVWGTPDHSV 
EQIEAFCRAI RPGEIYRIQG YAKVFNGACE VNVNDGITCL VDPVPQDRVE PSLFVYAPVD
IESVRLGLAR MAAKIEEPGI STLISMVMND APGFLDAPAA KFHHHAYIGG LAEHTLETAE
IALSLSGTVS RAEMDTDVLL AGALLHDIGK ATCFCRRGFS FVPLPEYTLV GHTAIGAAAL
MKHSAGVDPA RFGHILHIVM SHHGPHGDVQ PRTPEAWAVH FADNASAFLR EVSDDAADLA
PGEGRQGALS GKAVYRF