Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1870 |
Symbol | |
ID | 4846521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1864954 |
End bp | 1865667 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640116576 |
Product | glycosyl transferase family protein |
Protein accession | YP_001047778 |
Protein GI | 126179813 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGACG ATACACGCGC CGGCGGCGTG AGACCGGCAG ACTGCACCCT GGTGATCCCC GCATACAACG AAGAGCGGCG GATCCGGTCG CTCCTCGAGG ACGTCTCGGG TTTCCGAGGC AAACTCGTCT TCGTCTGCGA CGGAACCGAC GCCACTGCAG AGATCGTCGG TACGTTCGCG GAGGCTCACC CGTCGCTCTC CATCCGGTGC CTGGCGTTTC CGGCCCGGCT CGGGAAAGGG GGAGGCGTCG TCGCCGGGAT GGAGGCGGCG GCGACGCCCT TCGTCGGCTA CATGGACGCA GACGGTTCGA CCGCGCTATC CGAGATGGAG CGGCTCTTCG ACCGTCTCGC AACCGCCGAC GGCGCCATCG GCTCGCGCTG GGTTCCGGGC TCGGTCATCC CCGTGCGGCA GGGGTTCCGG CGCCGGGTCG AGAGCCGTCT CTTCAACCTG ATGGTCAGGT CACTCTTCGG GCTCGATTAC CGGGACACCC AGTGCGGCGC GAAAGCATTC CGGAAGGATG CGCTTGAGGA GGTTCTCTCC TCAATCCGGT CGACCGGGTT CGAGTTCGAC GTCGAACTCC TCTGGCGGCT GCGCCGGAAC GGCTACCGGG TGGAAGAAGT CCCGATCACC TGGGAGAACC GGGACGAGTC GAAGGTGATG ACATCGGACG CGAAGGCGAT GCTGATGGGG ATGCTCCGGC TCCGGTTCGG GTGA
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Protein sequence | MLDDTRAGGV RPADCTLVIP AYNEERRIRS LLEDVSGFRG KLVFVCDGTD ATAEIVGTFA EAHPSLSIRC LAFPARLGKG GGVVAGMEAA ATPFVGYMDA DGSTALSEME RLFDRLATAD GAIGSRWVPG SVIPVRQGFR RRVESRLFNL MVRSLFGLDY RDTQCGAKAF RKDALEEVLS SIRSTGFEFD VELLWRLRRN GYRVEEVPIT WENRDESKVM TSDAKAMLMG MLRLRFG
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