| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1865 |
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| Symbol | |
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| ID | 4846179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1858721 |
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| End bp | 1860367 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640116571 |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_001047773 |
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| Protein GI | 126179808 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTC TGGAGTTCGC TCAAGTCTGC GAGCACCTTG AAGGGACCCC CGGGCGCCTC
GATATGATCG AGCAGGTCGC CGCCGTCCTC CCCCGGCTCG ATGACGAGGA GCTTCCCGTC
TTCGTCCGGT TCGTCATGGG CAGGGTCTTT CCCGACTGGA GCACCAAAAA ACTCGGCGTG
GGCCCGAACC TTCTCTACGA CGCCGTGGCC TACGTCGTCG GGACGAAGCG GGAGACCGTC
CGCGAGGCGA TCAACACGAC CGGGGACGTG GGTCTCGCCG TCGAGGGGCT CCTTGCACGG
AAGGAGCAGA CATCGTTCTT CATCCAGGAA CTCGACCTCC TCGACGTCTA CCGGGAACTC
GAGCGGATGG CGGCCGCCGA AGGACAGCGG TCGCAGCGGG AGAAACTCCG CGTGGCGCAG
GGCCTCTTCG GGAACGCCCG GCCGCTCGAG GGGCGATACC TCGCGCGGCT GCTGCTCGAG
GAGCTCCGGA TCGGGATGGG GGAAGGGAAC GTCCGCGACG CCGTCGCGAA GGCGTTCGAG
CTTGACGTCC GCCTGGTCGA GCATGCCCAC CAGGCGCTGA ACGATCTCGG GGAGGTCGCC
CTCCTTGCCC GGCGCGACCC CGACGCGCTC TCCGGTGTGA CGATCGAGCC GTTCCGGCCG
GTGAAGATGA TGCTCGCGCA GGCGGGAACC ATCGCCGCCC AGATTGAGGA TCACGGCGAG
GTGGCGGTCG AGTACAAGTA CGACGGGAGC CGGTTCCAGT TCCACAAGGT GGGCGATGTC
TGCCGGATCT ACTCGCGGAG ACTGGAGGAC GTCACGGAGA GCCTCCCCGA CATCGCGAAC
CTCCTCCTGG AGGCGACCGA CCACGACGTC ATTCTGGACG GGGAAGCGGT CGCCGTCCGC
GACGGGAAGC CCATGCCGTT CCAGTACGTG ATCCGGCGGT TCCGGCGCAA GCACGAGGTG
GACTCGATGA TGGAGAAGAT CGAGCTCGTG CCGATGGTCT TCGATATCCT CTACCTGGAC
GGCGAGACGC TGATGGATCG CCCCCTCGCG GAGCGGCGGA AAGCCCTCGA CGAAGTGCTC
GGCGCACACG TCGCTCCGCA GTTCCCGGCC ACCGACGCGG CCGCGGCGGA GGCGATCTAC
GCCGAAGCCC TCGACCTCGG GCACGAGGGC GTGATGGTGA AGGTTCTCGA CTCGCCCTAC
ACTCCCGGCG TCCGGGGCCG CCTCTGGGTG AAGGTCAAAC CCGGCGTCGA GACGCTCGAC
CTCGTGGTCG TGGGGGCGGA GTGGGGCGAG GGCCGGAGGG CCGGGACGTT CGGCTCGTTC
CTGCTCGCGG TGCAGGACCA GGGCCGGCTC CTCCCGGTCG GGAAGGTTGC GACCGGGATC
ACGGACGAAG TCCTCGCGGA GCTCTATGCC CTCTTCAAGG ACCGGGTGAT CGCCCGCTCT
GGAAAGGAGG TGACGCTCGA GCCGGAGGTG GTCTTCGAGG TGGGCTACTC CGAGATCCAG
ACGAGCCCGA ACTACGAGAG CGGTTACGCG CTCCGGTTCC CGCGGTTCGT CCGGGTGCGC
GAGGACAAGA GCGTCGACGA GACCGAGACC CTCGACTCCC TCGCGGAACG CTACGGGCGG
CAGAGGAACG GGCAGGGATC ACTATAG
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| Protein sequence | MQFLEFAQVC EHLEGTPGRL DMIEQVAAVL PRLDDEELPV FVRFVMGRVF PDWSTKKLGV
GPNLLYDAVA YVVGTKRETV REAINTTGDV GLAVEGLLAR KEQTSFFIQE LDLLDVYREL
ERMAAAEGQR SQREKLRVAQ GLFGNARPLE GRYLARLLLE ELRIGMGEGN VRDAVAKAFE
LDVRLVEHAH QALNDLGEVA LLARRDPDAL SGVTIEPFRP VKMMLAQAGT IAAQIEDHGE
VAVEYKYDGS RFQFHKVGDV CRIYSRRLED VTESLPDIAN LLLEATDHDV ILDGEAVAVR
DGKPMPFQYV IRRFRRKHEV DSMMEKIELV PMVFDILYLD GETLMDRPLA ERRKALDEVL
GAHVAPQFPA TDAAAAEAIY AEALDLGHEG VMVKVLDSPY TPGVRGRLWV KVKPGVETLD
LVVVGAEWGE GRRAGTFGSF LLAVQDQGRL LPVGKVATGI TDEVLAELYA LFKDRVIARS
GKEVTLEPEV VFEVGYSEIQ TSPNYESGYA LRFPRFVRVR EDKSVDETET LDSLAERYGR
QRNGQGSL
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