| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1863 |
|---|
| Symbol | |
|---|
| ID | 4846236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1856895 |
|---|
| End bp | 1858043 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640116569 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047771 |
|---|
| Protein GI | 126179806 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1602] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATGCG CCGAGTGTAA GGGAAGGGGG TTCTGCGGGC TCGAACGCTG CCCTATCATG
AGCAGGTTCT ATGCGCAACT CCCGGTCCGG CAGAGCGACC ATTACCAGGG AGCAGCGCCG
TCGGTCTTTG TGGGGAGTTA CGGCTACCCG AAGGTTGCAG GCGGCCCGCT GATGATCGAC
GACGCCGACC ATCCGCCGGA CTGGGTGGCG CAGGGGCTCG GGATCGAGGA CATCGTGGGG
CTCCGGGCCC GGACGATCCG CGGTGCCGGC GAGGCGAAGA ATCTCTCCGG GAACATCCAG
GAGATCGCGC TCTCGAGCCT GCCGCTCGAC GTGGAAGTCC GGTTCACGAA ACCCGTCGCC
TTCGACCTCC GGTTCGACGG GACGATCGCC CCGGTCGGGC TCACCGGCGC CATCAAAAAG
ATGGACGTCC TCGGGAACGC CCGGGTTGAC CGGGCGGTCG ACCGGGCGAC GTCGGACACC
GATCTCTCCG CGACCGACGC CTGCGAGATC CTCAACGCCT CGGGCACCGA CGTCTACCGG
ATCACCCAGC TCCTCACCGC CGGGCTTCTC GGGAGCGAGA AGAAGCGGCG GGTCGTCCCC
ACCCGGTGGG CGATCACGGC GGTCGACGAC ACCGTCTCAA AGCAACTGAA GAAGAAGATC
GTCCGCTACC CTCCGCTCTC CGGGATAGAG GTCTTCTCCG GCGGACTCTA CGGCAACCAG
ATCGTCTGCC TCCTCGTCCC CGGGGACTGG AAGTTCGAGA TGATCGAGGT CTGGGGAAAA
CAGTCGCTCT GGGGCGGCGG GAACGAGTCG ATCACCGTGG ACGGCGAAGG CGCGACGAAG
TCCGGCTACT CCCCGATCGC GGGGGCCTAC TACTCGGCAC GCCTCGCGGT CGCTGAGTAC
CTGGAGAGCG TGCGCCGTTC GGCGCGGGTG CTTGTGCTCA GGAACGTCAC CGGCGAGTAC
TGGGCGCCGC TCGGCACCTG GGTCGTGCGG GAGGCGACGC GGAAGGCGAT GCAGGGCAAG
AAGACGGTCT GCGCCGACCT CCGGCAGGCG ACCGACCTCG CCTCCCGGCT GATCGGGTTC
GCTCACTGGC AGCCCCACAG CAGGCTCATC CCGGAACTTG CGACGCAGAA GACGTTGTTT
GATTTTTAG
|
|---|
| Protein sequence | MRCAECKGRG FCGLERCPIM SRFYAQLPVR QSDHYQGAAP SVFVGSYGYP KVAGGPLMID
DADHPPDWVA QGLGIEDIVG LRARTIRGAG EAKNLSGNIQ EIALSSLPLD VEVRFTKPVA
FDLRFDGTIA PVGLTGAIKK MDVLGNARVD RAVDRATSDT DLSATDACEI LNASGTDVYR
ITQLLTAGLL GSEKKRRVVP TRWAITAVDD TVSKQLKKKI VRYPPLSGIE VFSGGLYGNQ
IVCLLVPGDW KFEMIEVWGK QSLWGGGNES ITVDGEGATK SGYSPIAGAY YSARLAVAEY
LESVRRSARV LVLRNVTGEY WAPLGTWVVR EATRKAMQGK KTVCADLRQA TDLASRLIGF
AHWQPHSRLI PELATQKTLF DF
|
|---|
| |