Gene Memar_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1862 
Symbol 
ID4846335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1855858 
End bp1856892 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content70% 
IMG OID640116568 
Producthypothetical protein 
Protein accessionYP_001047770 
Protein GI126179805 
COG category[S] Function unknown 
COG ID[COG4069] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCC CGACGGCGGA CATCGTCATG GTGGTGCACG GCCCCGAGGC CTTCGATGCC 
GGCGACGTCG GGCGGCTGAT CGATCTGCTC TCGCCCCGGC GGGTGCTGGT CGCGGGGGTG
ATGGCCCGGA CGGCCGCCGA GGAGTCGGGG CTCCCGGTCG TCTGCACGGA CGAGCGGCCG
AGCGTGGTGC TCGGGGGCAT CTCGGAGCGT GCATGCCTGG TCAACCGGGG AAAGACCCCG
GAGTCCGGGC GGATATTCGG CGAACTTGTC GCCGGCAGGC TCCCGGGGCT CGTCCACGTC
GAGACCTCGA GCGGCACCGT CTACTGCTGG AACCGCGGGG ACAGCACGCT CGCTGAGGAG
ATCGCACGGC TGACGGGTTA CGCCCTCGTC TCTATAGAGA GCGACGCCGC CCGGCGGGAA
GGCGTGCGGG AGGTTCGTGG GTGCCTGCCC GGGGAGGCGG TCTTCGTGAA CGGGTTTGTC
ATCGGAATCG CGACGGCGGA GACGGTCGTC CTCGCGAGCG AGAACGGGAC GCTCCGGGCA
GTCTCGGGGC TCGATCCGAA ACCGCACGGG TTTGAGAAAC TCCTCCGCGC GGGTCTTCCC
GATATCCGGA AAGCCTGGTG CAAGAGCGGG CCGGTGCGGA AGGTTTCGCC CCGGCAGGGC
AAGCGCGCCC GCCGCGGGGG CCGGGTCGCG GTCATAGACC ACTGCGGCCA TACCCTCTAC
CGCGAGATCG GGGAGGATAT CTCCGGCGTC CTTGCCGTCG GCGACGATAC CACGGCCGTC
TGCGGGCACA TCTGCTCGCA CTCCGGCATC CCGGTCTTCG GCGTGGTCGA CGGGGACGCC
GACGCCATCG TGACACCCGG GTACGCGCCC GGGTCGGTAG TGGTCGAGGT TCTGGACGGC
CGCGACGACG ACGTCGGGCG GGAACTTGCG GCCGTCCGGG ATCTCGAGAC CGCTTCATGG
GAGGAGTGGG TCGAGGAGAC GCTCCGCGTC CTCGCAGGGA GAGTGCGGGT CGTCCTCGAC
CTTCGTGGAG GATGA
 
Protein sequence
MTSPTADIVM VVHGPEAFDA GDVGRLIDLL SPRRVLVAGV MARTAAEESG LPVVCTDERP 
SVVLGGISER ACLVNRGKTP ESGRIFGELV AGRLPGLVHV ETSSGTVYCW NRGDSTLAEE
IARLTGYALV SIESDAARRE GVREVRGCLP GEAVFVNGFV IGIATAETVV LASENGTLRA
VSGLDPKPHG FEKLLRAGLP DIRKAWCKSG PVRKVSPRQG KRARRGGRVA VIDHCGHTLY
REIGEDISGV LAVGDDTTAV CGHICSHSGI PVFGVVDGDA DAIVTPGYAP GSVVVEVLDG
RDDDVGRELA AVRDLETASW EEWVEETLRV LAGRVRVVLD LRGG