| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1835 |
|---|
| Symbol | |
|---|
| ID | 4848281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1832396 |
|---|
| End bp | 1833148 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640116540 |
|---|
| Product | dihydropteroate synthase |
|---|
| Protein accession | YP_001047743 |
|---|
| Protein GI | 126179778 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTCA TCAACTGCAG CCCCGAATCG TTCTACCGGG GCTCCTACAT CCCGGCCGGA
AAAGTATACG ATCGCGCCCT CGCCATGGTG GCGGCGGGCG CCGATATGAT CGATCTCGGG
GCGCGGAGCA CGGCCCCGGG CTCTTCTCCA ATAACCGTAG CCGAAGAGGC GGCACGGGTG
GACGCGGCCC TCTCGGAACT CGACGGGACC GGGATCACCC TCTCGGTGGA CACCCGGCAC
CCGGAGGTGC TCGAGGTCTG CCTCCGCCAC GACGTCCATG CGGTGAACGA CATCTCCGGG
CTTGCCGAAG AGCGCTACGC GCGGGCGGTC GCCGACTCCG GGCTGCCGGT CTTCGCGATG
GCGAGTTGCC GGGAGCCCGG CGACGCCGCC GGGCTTGCCG CCACGCGGGA TGCCCTCGAA
GCAGTCGTGA AGAGGTGCGC GCTTCTCGGG ATCGAGGAGT ATGTCCTCGA TCCCGCCGTC
GGGCGATGGG TCCCCGGGCG GACGAGCGAG GACGACTGGG AGCTCTGCCG GAACTTTACC
TCGTTCCTGG AGTTCGGCCG CCCGGTGCTT GCCGCGGTCT CGAGGAAGAC GTTCATCGGC
GACCTGCTCG GCCGCCAGCC CGAAGACCGG CTCGCGGGCA CGCTCGCGGT CACGACGATG
CTCGTCTCGG CGGGAGCAGC CGTCGTGCGG AGCCACGACG TCGCCGAGAC CGCCGATCTC
CTGCGGGTCC ATGCAACGAT GAGGCAGACA TGA
|
|---|
| Protein sequence | MGVINCSPES FYRGSYIPAG KVYDRALAMV AAGADMIDLG ARSTAPGSSP ITVAEEAARV
DAALSELDGT GITLSVDTRH PEVLEVCLRH DVHAVNDISG LAEERYARAV ADSGLPVFAM
ASCREPGDAA GLAATRDALE AVVKRCALLG IEEYVLDPAV GRWVPGRTSE DDWELCRNFT
SFLEFGRPVL AAVSRKTFIG DLLGRQPEDR LAGTLAVTTM LVSAGAAVVR SHDVAETADL
LRVHATMRQT
|
|---|
| |