| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1803 |
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| Symbol | |
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| ID | 4846177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1794321 |
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| End bp | 1795151 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640116502 |
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| Product | DNA-directed RNA polymerase subunit D |
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| Protein accession | YP_001047711 |
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| Protein GI | 126179746 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0972243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATAG CGTTTTCTCG ACTGGACGAG AGAGTCGCCA AATTCACCCT GAGCGGCGTT
TCGATGTCGT TTGCCAATAT GTTACGGCGA GCGATGATCA GCGAAGTGCC GACACTCGCC
ATCGAAGATG TCCGCATCTA CGACAATACA AGCGTTCTCT TCGATGAGAT GCTGGCGCAC
CGCCTGGGGC TCATACCACT CCGAACCGAC CTGAAACGCT ATAAGCCGCG CAGCGAATGC
ACCTGCGAAG ACGCAGGATG CCCGGTCTGC ACTGCGACCT ATACGCTCTC CGTCGAGGGG
CCGAAGACCG TCTACTCAAG CGACCTGATT CCGCAGGATC CCGACGCCGC ACCGGCGGAT
GAGAAGATCC CCATCATCGA ACTCGCGCGG GACCAGAAGC TCGTGCTCGA AGCGCAGGCA
ATCGTCGGCA CCGGAAAAGA GCATGCCAAA TGGCAGGCGA CGACCGCCTG CGGTTACAAG
AACTACCCGG TGATCGCCAT CGATGAACGG TGCGACGGGT GCGGCATGTG CATCGACGAG
TGCCCGAGGA GCGTGCTTGA GACCGCACAG GGAAAAATCC GGGTCGTCGA AGAGCGGCAG
GAACTCTGTT CCCTCTGCAG GCTCTGCGAG CGGGCATGCC TTGCCGGCGG CATCGGCACC
GAGCCGGCCA TCCATATCGG TACCGATGCG GAGAGATTCA TCTTCGTGGT GGAAGGCGAC
GGCTCGATAC CCGTCCGCGA GATCATCGAG AGAGCGCTAC AATACATCCA GAAATCATCA
GACGACCTGG TAGACGTGAT GAACGAGATA ACGGGAGAGG GGACTGAATG A
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| Protein sequence | MEIAFSRLDE RVAKFTLSGV SMSFANMLRR AMISEVPTLA IEDVRIYDNT SVLFDEMLAH
RLGLIPLRTD LKRYKPRSEC TCEDAGCPVC TATYTLSVEG PKTVYSSDLI PQDPDAAPAD
EKIPIIELAR DQKLVLEAQA IVGTGKEHAK WQATTACGYK NYPVIAIDER CDGCGMCIDE
CPRSVLETAQ GKIRVVEERQ ELCSLCRLCE RACLAGGIGT EPAIHIGTDA ERFIFVVEGD
GSIPVREIIE RALQYIQKSS DDLVDVMNEI TGEGTE
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