Gene Memar_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1781 
Symbol 
ID4846635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1774223 
End bp1775263 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content60% 
IMG OID640116479 
Producthypothetical protein 
Protein accessionYP_001047689 
Protein GI126179724 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGGT CTCAGTGGAA GTGGCTGATC GTCTCGTTAA GTTTTAGCGC TCTTGTCATG 
GCGGGCGTTC TGTATTTCAC CGTCGACGAG TCGACGATCG AGTACCTCAG CCGGATAAAC
CCGTTCTACC TGGTTCTTGC CGTCCTCTTA CACATCCTCT CGCTCGGGTT CTGGGCGCTC
CGCATCCAGA AGATGTCGGC GTCGCTCGGG TACCGGGTGC GCCTGCGGCA CTGCCTGAAC
CTGGTACTGG CGAACATGCT CGTTGCGGCG GTAACTCCGT CCCAGGCGGG CGGGGAACCG
GTCAGAGTTC ATGAACTCTA CCGGGCGGGC GTTCCGGTCG GGGACGCCAC CGCCGTCGTC
ATTATGGAGC GGATCCTCGA CGGGATCGTT CTCGGGGCAC TCGGGGCCTT CGCCATGCTC
TTCCTCGGCA ACTACTGGAG CAGCCTCACC TCGGGGTTCA GCGGGGTGAG CGTCATGATG
TACGTCGCCT GGATCTTCGT CACCTTCTTC GTACTGGTCT TCGTCTACTC CGTCAGGAAC
CCGGACCATC TCAAGCGGGT GCTCAAATGG GTCTCGCGGT GGATTGACCG CCGCTGGCAC
TTAAAGCGGC TCGAAAACCT GCTGGAGACG ATCGACCGCG AGGTGGACAA CTTCAACCGG
GGGCTCGTCA AGTTCGTGAA CCACGGCAAA AGCGGCCTCG TGTGGGGGAT GCTCTTCACC
CTGCTCTTCT GGATATCGGA GTTCGTCATT GCATCGCTGC TCCTCGTGGG CCTCGGGCAG
CCTCCGCATC TCATCGAGTC GTTCGTCGTC CAGCTCGTCA TCGCCATCAT CATGATGATC
CCGCTCACCC CCGGGGGCTC GGGCGTTGCG GAGATCGGCG CCACGTCGCT CTACAGCCTC
TTCGTCCCGT CTGCGATCGT GGGTGTTTTC GTCCTCCTCT GGCGGCTGAT CTTCTACTAC
CTGAACATCC TTCTCGGTCT TCTTTCGAGT CTTGTCATTG TCCGGCGTGA GTTTCTCGCC
CGCGTCAAAA AGCAGCGGTG A
 
Protein sequence
MKRSQWKWLI VSLSFSALVM AGVLYFTVDE STIEYLSRIN PFYLVLAVLL HILSLGFWAL 
RIQKMSASLG YRVRLRHCLN LVLANMLVAA VTPSQAGGEP VRVHELYRAG VPVGDATAVV
IMERILDGIV LGALGAFAML FLGNYWSSLT SGFSGVSVMM YVAWIFVTFF VLVFVYSVRN
PDHLKRVLKW VSRWIDRRWH LKRLENLLET IDREVDNFNR GLVKFVNHGK SGLVWGMLFT
LLFWISEFVI ASLLLVGLGQ PPHLIESFVV QLVIAIIMMI PLTPGGSGVA EIGATSLYSL
FVPSAIVGVF VLLWRLIFYY LNILLGLLSS LVIVRREFLA RVKKQR