| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1758 |
|---|
| Symbol | |
|---|
| ID | 4847709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1755384 |
|---|
| End bp | 1756055 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640116456 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_001047666 |
|---|
| Protein GI | 126179701 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATGGA GAAGACCGTC GCGCGAGATC TGGGGCGAAT TCGACCAGAT GATAGGGGAT
ATGCAGAAAC AGTTTTCCGA GGTGATGGAG CGGCTCTCGG GAGCCGCACA GCAGGTGCCT
GGAGGAGCCG GAACGGTGGT CGACGTCCTG GAGCACGATA CGGACGTCGT GGTCGTTGCC
GACCTCCCCG GCGTCGCGAG GGAGGGGATA TCCGTCCGGC TCCTTGATGC GAGAACGCTC
AGGATCACCG CCCGGCGGGA GGAGGCAAAG GAGGAAAGGC AGGCCGGCTA CCACGTGCGG
GAGCGGAGGT TCGGCGCGAT CTCCCGGACG GTCTCCCTCC CCACCGACGT CCGCGACGAG
GGGGCGACCG CCACGTTCAA GAACGGCGTC CTCGAGGTGC GGCTGAAGAA GGTGGCCGAG
ACCCGCGGAA AAGAGATCTC GGTGAGCGAA GAGGCCGCGA AGCAGCACAG AGAACAGGTG
GAGGAAGGAT ACCGGGAGGC GCGGGAGAGG ATCGAGCCGT CCGGGTACCC GCGATCCCGG
GACGTGATGG AAGCGGCGGA GGGGATCGAA CTCGAGGAGC GAGGGACCCC CAAAGAACAG
GAGACGGCCG CGAAGCTCCG CAAGCAGAAG GAGAAACTCT ACGAGGAGGG GAAGAGGAAA
CTCGAGGAGT AA
|
|---|
| Protein sequence | MAWRRPSREI WGEFDQMIGD MQKQFSEVME RLSGAAQQVP GGAGTVVDVL EHDTDVVVVA
DLPGVAREGI SVRLLDARTL RITARREEAK EERQAGYHVR ERRFGAISRT VSLPTDVRDE
GATATFKNGV LEVRLKKVAE TRGKEISVSE EAAKQHREQV EEGYREARER IEPSGYPRSR
DVMEAAEGIE LEERGTPKEQ ETAAKLRKQK EKLYEEGKRK LEE
|
|---|
| |