| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1741 |
|---|
| Symbol | |
|---|
| ID | 4847802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1740298 |
|---|
| End bp | 1741206 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640116440 |
|---|
| Product | nucleotide-binding protein |
|---|
| Protein accession | YP_001047650 |
|---|
| Protein GI | 126179685 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA GCAGAAAGTT TTCATCAGAG GAACTAAGAG CGCTATCGGA GAATTTGAGG
GAGCAAAGAA ACACAGCTGA AAAACTGTTA AAGGATAGAC ATGGTGAAGA CTTTAATCGA
CCCCTTGCAA AACAATTTGT TCGTGATTTA TTTGGAGGAG CAACCTGCGG AATAGAGGAC
GCAGAGGTAC GCGAGTGGTA CAATGAGACA CTAGCATTAG TGGACCACGT ATTTGGTACG
CAAAATTTGT ATGTTCGAAG ATTCATCAAA CTCCAAAAGG AGCATGATGT TGATATTTTC
GGTTTTAATT CGTTTTCTAC AGGCCGATTA CTTAAAGACT CATTCAATAT TTTAGAGGAT
TGCATTAAGC AACTAGAAAT GAAGATAAAT ATAACGAGTA AGCCGAAAAA GCAAGATAGG
CGAGTTTTCA TCGTTCACGG ACATAATGAG CAAACAAAAG ACGAAGTAGA AAAATTTCTC
ACTAAATATT CATTAGAGCC GATAATATTG CACAAACAGG CAAATCTAGG CAAAACAATT
ATTGAGAAAG TCGAGCACTA TAGCAATTCG GTGCGTTTTG CAATAATATT ATTGACCGGA
GATGATATCG GCGCAAAGAA AAACACACCT CACAATCCCC CAAGTTTCCA AACTAAAAAA
GGTACACTCA TTGCAAATGA CCAATGGAAA AATGCGATCC TAGACAATTT AAAGAAAAGA
GCAAGACAGA ATGTTATTTT TGAATTCGGC TATTTCGTTG GATTGTTAGG TCGGGAAAAC
GTAATCATCC TTTATGAGGA TGGCGTTGAA CTTCCATCAG ATACTCAGGG CCTCTTGTAC
ATATCATTGA ACAGTGATTG GCAAAACCAA CTCGTGAATG AGATTAAAGC TGTTGGAATA
GATTGCTAA
|
|---|
| Protein sequence | MADSRKFSSE ELRALSENLR EQRNTAEKLL KDRHGEDFNR PLAKQFVRDL FGGATCGIED
AEVREWYNET LALVDHVFGT QNLYVRRFIK LQKEHDVDIF GFNSFSTGRL LKDSFNILED
CIKQLEMKIN ITSKPKKQDR RVFIVHGHNE QTKDEVEKFL TKYSLEPIIL HKQANLGKTI
IEKVEHYSNS VRFAIILLTG DDIGAKKNTP HNPPSFQTKK GTLIANDQWK NAILDNLKKR
ARQNVIFEFG YFVGLLGREN VIILYEDGVE LPSDTQGLLY ISLNSDWQNQ LVNEIKAVGI
DC
|
|---|
| |