Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1723 |
Symbol | |
ID | 4846420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1726528 |
End bp | 1726953 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640116421 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_001047632 |
Protein GI | 126179667 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACA TCATCGATAC CCTGGAGGAC TCCGAGAGCC TCAGCGTGTT TCTCGATCTG GTCCGGATTG CCGGCATGGA ACCGATGCTC CGCGAGAGGG GGCCGTACAC GGTCTTCGTC CCGACGGACG AGGCGTTTTC GAGGGTTCCC AGGGATCGGA TGGACGAGAT CCGCCAGGAT GCGGACAAAC TCCTCCTGAT CGTGAGTTAC CACGTCGTGC CGGGGCAGTT GACCTCGGAG GATCTCCGGA GTATCGGCGC CGTCAGGTCG AGCCTCGGGA CGGATCTCGT CCTACGGTCG TCTGACCGGG GTATCACCGT CAACAGCGTC CCCATCGTCG AGACAGATGC GTTCTGCACG AACGGCATCT GCCACGCCAT CAGCGCGGCG CTCGTCCCGC CGACGCTGGA GATCGTCACT CCCTGA
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Protein sequence | MKNIIDTLED SESLSVFLDL VRIAGMEPML RERGPYTVFV PTDEAFSRVP RDRMDEIRQD ADKLLLIVSY HVVPGQLTSE DLRSIGAVRS SLGTDLVLRS SDRGITVNSV PIVETDAFCT NGICHAISAA LVPPTLEIVT P
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