Gene Memar_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1723 
Symbol 
ID4846420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1726528 
End bp1726953 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content63% 
IMG OID640116421 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_001047632 
Protein GI126179667 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACA TCATCGATAC CCTGGAGGAC TCCGAGAGCC TCAGCGTGTT TCTCGATCTG 
GTCCGGATTG CCGGCATGGA ACCGATGCTC CGCGAGAGGG GGCCGTACAC GGTCTTCGTC
CCGACGGACG AGGCGTTTTC GAGGGTTCCC AGGGATCGGA TGGACGAGAT CCGCCAGGAT
GCGGACAAAC TCCTCCTGAT CGTGAGTTAC CACGTCGTGC CGGGGCAGTT GACCTCGGAG
GATCTCCGGA GTATCGGCGC CGTCAGGTCG AGCCTCGGGA CGGATCTCGT CCTACGGTCG
TCTGACCGGG GTATCACCGT CAACAGCGTC CCCATCGTCG AGACAGATGC GTTCTGCACG
AACGGCATCT GCCACGCCAT CAGCGCGGCG CTCGTCCCGC CGACGCTGGA GATCGTCACT
CCCTGA
 
Protein sequence
MKNIIDTLED SESLSVFLDL VRIAGMEPML RERGPYTVFV PTDEAFSRVP RDRMDEIRQD 
ADKLLLIVSY HVVPGQLTSE DLRSIGAVRS SLGTDLVLRS SDRGITVNSV PIVETDAFCT
NGICHAISAA LVPPTLEIVT P