Gene Memar_1685 details

Gene Information

• Locus tag: Memar_1685
• ID: 4846338
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1685407
• End bp: 1685907
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640116381
• Product: PUA domain-containing protein
• Protein accession: YP_001047594
• Protein GI: 126179629
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1370] Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit
• TIGRFAM ID: [TIGR00451] uncharacterized domain 2

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.566422
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGTCAA CCGAATACTC AAACGACAGT TCGCTTCGGC GGATCCGAAC GATAGCTGAC 
TTCCAGTTCG GTGCCGGGGC CGGGGTTGCG ATCTTCCCCG ACGAATGTAC CTTCCAGTTC 
TCCACGACCG GGCGCATCCG CCAGGTGCGC CTCGGGAAGG AGAGACTTGC GACCGTTCGC 
GCACAGGACG GCCGCCTGAC CCTCGGGATA ACCGCAGCGG CGCTACTTTG CGCCCATCTC 
GCCCCCCCGG CCTACCGGGT GGCGGTGCAG GAGGACGTGG CGCCGTTCGT CGCAGACGGG 
AAGAACGCGA TGGCAAAACA CGTCGTCGCT GCCGACGAGG GCATCCGCGC AGGAGACGAG 
GTGCTGGTGG TGACCGGCGA CGACGTGCTC CTCGCCACCG GGGCGGCCCT GCTCTCCGGG 
CGGGAGATGC TGGCATTTAA TTACGGTGTA GCGGTAAAAG TACGGCAGGG GAGAGGATCC 
GAATGTTTCC AGGAAAAATA A 

 

Protein sequence

MVSTEYSNDS SLRRIRTIAD FQFGAGAGVA IFPDECTFQF STTGRIRQVR LGKERLATVR 
AQDGRLTLGI TAAALLCAHL APPAYRVAVQ EDVAPFVADG KNAMAKHVVA ADEGIRAGDE 
VLVVTGDDVL LATGAALLSG REMLAFNYGV AVKVRQGRGS ECFQEK