| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1678 |
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| Symbol | |
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| ID | 4848355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1678396 |
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| End bp | 1679118 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640116374 |
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| Product | proteasome subunit alpha |
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| Protein accession | YP_001047587 |
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| Protein GI | 126179622 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCAC AATATCAGAT GGGATATGAC CGGGCAATCA CGGTGTTCAG CCCGGACGGA
AGGCTTTACC AGGTCGAGTA CGCCAGAGAA GCGGTGAAAC GAGGCACGAC GGCCGTCGGA
ATCAAGTGCA GCGAAGGCGT CGTGCTGATC GTCGATAAAA GGGTGACGTC CCGGCTCCTC
GAACCGGTTT CTATCGAGAA GATCTTCAAG ATCGACGCGC ATATCGGCGT TGCGTCCTCC
GGCCTCGTCG GCGATGCGCG GTCTCTCGTG GATCGGGCGC GAGTTGAGTC CCAGATCAAC
CGTGTCTCCT ACAACGAGCC GATCAACGTC GAGATTCTCG CGAAAAAACT CTGCGACCAC
ATGCAGACCT ACACCCAGTT CGGCGGTGCA CGCCCCTACG GAACCGCTCT CCTGATCGCA
GGAGTCAGCG ACGGGGAGGC ACGGCTCTTC GAGACCGATC CGAGCGGCAC GCTGCTCGAG
TACAAGGCGA CCGGGATCGG AACCGGACGT CCTGCGGTCA TAAAGACCTT CGAGGACGAG
TACCAGGAGG ATGCGGATTT CTCCGGCGCC ATCAGGCTCG GAATCAAGGC CCTGCACGCC
GCGACGGAGG GCAAGCTCGA CGTGAGCGCC ATCGAGATCG GCGTCGTCTC CATCGAGACC
GGGGAGTTCC GGAAGATGGA GAAGGATGAG GTAAAGGCAT ACGTCGACCA GTTCGAAGAG
TGA
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| Protein sequence | MQPQYQMGYD RAITVFSPDG RLYQVEYARE AVKRGTTAVG IKCSEGVVLI VDKRVTSRLL
EPVSIEKIFK IDAHIGVASS GLVGDARSLV DRARVESQIN RVSYNEPINV EILAKKLCDH
MQTYTQFGGA RPYGTALLIA GVSDGEARLF ETDPSGTLLE YKATGIGTGR PAVIKTFEDE
YQEDADFSGA IRLGIKALHA ATEGKLDVSA IEIGVVSIET GEFRKMEKDE VKAYVDQFEE
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