| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1677 |
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| Symbol | |
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| ID | 4846104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1677683 |
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| End bp | 1678384 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116373 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_001047586 |
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| Protein GI | 126179621 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTC TCGACCAGGC AGTAGTAGCA CGGCTTGAAA GTTACGGAGA ACGGTTCGAG
GTCCTTGTCG ACCCCAACCT GGCCATGCGC ATCCGGCAGG GCGAAGACGT CGACCTGGAG
GAGGTCGTTG CCGCCGATTC CATCTTTTCG AACGCTGCCC ATGCCGAACG GGCCTCCGAG
GAGGCTCTCC TGAAGGTCTT CAAGACGACC GAGTTCGAAG AGGCGGCGCT CCGGATCATC
CGGAAGGGCG AGATCCACCT CACCTCCGAA CAGCGCCGCC ATCTCATCGC GGAGAAGCGG
AACCGGGTCG TCACGTTCAT CGCGAGGAAC GCCGTCAACC CGCAGTCCGG GTTCCCTCAC
CCCCCGCAGC GCATCGAGCT TGCGATGGAA GAGGCGCGGG TGAGCATCGA CCCCTTCAAG
TCCGTCGAGG AGCAGGTCAA AGAGGTGGTC AAGGCGCTCC GCCCGCTCCT CCCCATCCGG
TTCGAGGAGA TCCGGATCGC CGTGAAGATC CCGGCGGATT ATGCCGCGAG AGCCTACGAG
ATCACGACCG CAGGATCGCT CGAGCGGGAA GAGTGGCAGA AGGACGGATC CTGGATCGCC
GTCGTCAAAA TTCCGGCGGG CATCCAGGAA GAGTTCTACG ACCTGGTGAA CAAGGTTTCC
AAGGGGAATG CGGAGACCCG GATCGTCGAA CGGATGTCGT GA
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| Protein sequence | MIPLDQAVVA RLESYGERFE VLVDPNLAMR IRQGEDVDLE EVVAADSIFS NAAHAERASE
EALLKVFKTT EFEEAALRII RKGEIHLTSE QRRHLIAEKR NRVVTFIARN AVNPQSGFPH
PPQRIELAME EARVSIDPFK SVEEQVKEVV KALRPLLPIR FEEIRIAVKI PADYAARAYE
ITTAGSLERE EWQKDGSWIA VVKIPAGIQE EFYDLVNKVS KGNAETRIVE RMS
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