| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1666 |
|---|
| Symbol | |
|---|
| ID | 4847680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1669946 |
|---|
| End bp | 1670863 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640116360 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047575 |
|---|
| Protein GI | 126179610 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGCG ACCCTTACCA TCCGCGCAAA TTCCCTCTCG GGGCTGTGAT CGTCATCCTT
GTCATCATCG GCATAGCCGC CATCTGGGGC GGGCAGATCG TCTCGTCGGT AGGAACGACG
GTCACCGGGA CGCTTGAAGC GTCGGGCCTC AGTTCACCGG AGATCTCCAA CGAGACCCTG
GAGAAAGGAC CAAAGACCAT CAACTATCCG TATGTTCTCC GCGGCAAGCC GGGTTCGATC
CGGTTCGATG CCTACCGGGG TGTCAACGAC TATCTGTCCA CGAGGCATCC TACCCCGTTC
CGTATCGAAC GTGAATACTG GCTCCAGTTT ATCAATGAGA GCGTCCAGGA CCGATACCTG
CACCAGCTTG CCGGCAACAT CCGGGCTGCC GAGTCCGAGC CCGACAACCA GGTGCGTACC
GCGATCAGCA TGGTGCAGCA GATCCCTTAC GCCGATTACT CGTTCGATAC GGCGGCCAAG
TACCCGTACC ACGTGCTCTA CCACCAGGAC GGGGACTGCG ACGAGAAGTC GCTCCTGCTT
GCGTACATCC TTCGTGACCT GGGGTACGGC GTCGCGCTCT TCGAGTTCGA GCAGGAGAGC
CATATGGCCG TGGGCATCAG GGCACCCGAC CAGTACTGCT ACCGGGACAC GGGGTACGCG
TTCATCGAGA CCACGGTGCC GGCCATCCCG ACCGATGCCG GTGGGGAGTA CGGAGATTCC
GGGAAGAAAC TGACGTCGAA GCCGAAAGTC TTCGTCATAG CCGAAGGAGA CTCCTTCGAG
AGCATCTGGC GCGAGCACAC CGATGCCGTC GAGTGGAACA AGATACGGGA CAAGGTACAG
AGCGAGGGAC CCAAACTGGA CTCATATTCC TACGGGCGTT ACCGGAATCT AGCTCAGACA
TATGGAATGC CGTATTAG
|
|---|
| Protein sequence | MSGDPYHPRK FPLGAVIVIL VIIGIAAIWG GQIVSSVGTT VTGTLEASGL SSPEISNETL
EKGPKTINYP YVLRGKPGSI RFDAYRGVND YLSTRHPTPF RIEREYWLQF INESVQDRYL
HQLAGNIRAA ESEPDNQVRT AISMVQQIPY ADYSFDTAAK YPYHVLYHQD GDCDEKSLLL
AYILRDLGYG VALFEFEQES HMAVGIRAPD QYCYRDTGYA FIETTVPAIP TDAGGEYGDS
GKKLTSKPKV FVIAEGDSFE SIWREHTDAV EWNKIRDKVQ SEGPKLDSYS YGRYRNLAQT
YGMPY
|
|---|
| |