| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1648 |
|---|
| Symbol | |
|---|
| ID | 4846293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1656326 |
|---|
| End bp | 1657306 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640116342 |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase |
|---|
| Protein accession | YP_001047557 |
|---|
| Protein GI | 126179592 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGATA CGGCAATCAA CGTATTGAAG ATTCTCGAAG AATCGCCCGG CCCGGTATCA
GGGGAACGGA TTGCGGAGCA GCTGGGCATC ACCCGGTCGG CCGTCTGGAA GCAGATACGC
GAACTCCGGA GGCTGGGATA CGGGATATCG TCGTCCCGGG TGGAAGGTTA CCACCTCGAG
ACGAAGACCG ACCGGCTCCT CCCCTACGAG ATCAACAAGA TGCTCCGTAC CCGGGTCATC
GGGCGGCAGA TCCGTCAGTT CGACAGCACC GCCTCCACGG GCTGGGTCGC GAAGAAGCTT
GCCGCCGAGA CCGATCCTGA AAACCTGCAC GGCATGGTGA TCATCGCCGA GGAGCAGACC
GGGGGGGTGG GACGGCTCGG ACGCGCCTGG GTCTCTCCTG CCGGCGGCAT CTGGGCCACC
ATCCTTTTGA AACCGAAGAT CCCGCTCGAC CACCTTTTCA TGATCACCAT GGCCGGGTCG
GTCGCGATTG CCCGTGCCAT CCGCAAGGAG TACGACATCA GTGCGCTCAT CAAGTGGCCC
AACGACATCT TTATCGGAGA CAAGAAGGTC GCCGGTCTGC TCCTGGAACT CGCTGCCGAG
GCGGATACCG TGCACTACGC CCTCCTGGGG CTTGGGATCG ATGCGAACGT CTCTCTCGAC
GACCTCTCCT CGAACCTGCG GGAGACCGTG ACCACGCTCC AGGCCGAGGT CGGCCGCGAG
GTCGACCGGG TGGCGCTCCT TGCCCGGGTT CTGCGGGAGT TCGAACTGCG CTACCAGCAG
CTCGAGGACG GCGAGTACGA CTCCATCATC CGCGAGTGGA AGAGCCTCTC CCGGACGCTC
GATCACCGGG TGGCCATCAA GACCGTCAAC AAGACCTTCT CGGGAGAGGC CATCGATATC
GACGAGCACG GTGCCCTGAT CATCCGGAAA GACAACGGAA AGATAGAGCG GGTCATCGCC
GGCGACTGTT TCCAGCTCTG A
|
|---|
| Protein sequence | MKDTAINVLK ILEESPGPVS GERIAEQLGI TRSAVWKQIR ELRRLGYGIS SSRVEGYHLE
TKTDRLLPYE INKMLRTRVI GRQIRQFDST ASTGWVAKKL AAETDPENLH GMVIIAEEQT
GGVGRLGRAW VSPAGGIWAT ILLKPKIPLD HLFMITMAGS VAIARAIRKE YDISALIKWP
NDIFIGDKKV AGLLLELAAE ADTVHYALLG LGIDANVSLD DLSSNLRETV TTLQAEVGRE
VDRVALLARV LREFELRYQQ LEDGEYDSII REWKSLSRTL DHRVAIKTVN KTFSGEAIDI
DEHGALIIRK DNGKIERVIA GDCFQL
|
|---|
| |