Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1643 |
Symbol | |
ID | 4846784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1651883 |
End bp | 1653631 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640116337 |
Product | pyruvate carboxylase subunit B |
Protein accession | YP_001047552 |
Protein GI | 126179587 |
COG category | [C] Energy production and conversion |
COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.667683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGCTG CCAAATTAGA TTCACTCAAT ATCACCGATA CCACGCTTAG GGACGCGCAT CAGTCGCTCA TCGCCACCCG CCTCCGGACT GAGGACATGC TCCCTCTTGC CCGTGCCATC GACGACGTGG GTTTCTTCTC CGTCGAGGCC TGGGGCGGGG CGACCTTTGA CAGCTGCATC AGGTTCCTCA ACGACGATCC CTGGGAACGT CTCCGGGTGC TGAAGGCAGA GCTCCGGCGC ACGCCTATCC AGATGCTCCT GCGGGGCCAG AACCTCGTGG GCTACCGGCA CTACCCCGAT GACGTGGTGG AGAAGTTCGT AGAGGCGTCG GCGCGAAACG GGGTCGACAT CTTCCGGGTC TTCGATGCGT TGAACGATAT CCGGAACATG AAGAAAGCGA TGGAGGAGGT CAAGAACGTC GGGGCGCACC TGCAGGGCGC GATCTCCTAC ACGACGAGCC CTGTTCATTC CGTCGCGACG TTTGTCGAGA TGGCGGAAGA ACTCTATACG CTCGGCTGCG ACTCGATCTG CATCAAGGAC ATGGCCGGCC TGATCATGCC GCACGATGCC CGCGACCTCA TCACGGGGAT CAAGAAGACG GCGGACGTCA GGGTCTGCCT CCACTCCCAC TGCACGAGCG GCGTCGCGCC CCTGAGTTAT CAGGCGGCGA TCGATGCGGG CGTGGATATC CTGGATACGG CGATGTCGCC GTTCGCCCTC GGCACCTCCC AGCCTCCGAC GGAGAGCGTC GTTGCCAGCG TTGCCGGGAC GGCGCGCGAC ACCGGGATCG ATCTTCTCCC GCTCCGGAAG GTCAGGAACA TCTGCCGCGA TATGCGGGGT AAGTACGAGC CGCTCTTCAA CTCAATCGCC GACCGGGTCG ACTCGGACGT GCTGATCTAC CAGCTCCCGG GCGGGATGAT CTCGAACCTC GTCTCGCAGC TCAAGGAGCA GGATGCGCTC GACCGCCTGG ACGAGGTGCT CCGCGAGATC CCCCGTGTGA GAGAGGATCT CGGCTACCCG CCGCTCGTTA CGCCGACGAG CCAGATCGTG GGCACCCAGG CGGTTTTCAA CGTCCTGATG GACGGGGAGC GCTACCGGAA CGTGACGAAA GAGGTGAAGG ACTACGTCCG CGGCCTCTAC GGACGCTCTC CCGCCCCGAT CAGCCCCGAG ATCCGCAGAA CGATCATCGG CGACGAGGAG CCGGTCACGG TTCGCCCGGC GGACCTCCTC GAACCCATCT ACGAGCAGAT GAAGAAGGAG GCGGAGGAGC AGGGTCTGGT TACCCGGGAT GAGGACGTCC TCACCTACAT CCTCTACCCG AGCGTCGCGC CGTCGTTCCT CAGGGGCGAG CGCCAGCCCG AGGCGATCCC CGAGAAGGCG GCAGCCGGAC CGGCGGGGGT TGCGGAGATC CCCCGTTCCA TGGAGGTCGA GGTGGACGGC GAGATCTTCT CCGTTAGGAT CGTCACCGTC GAGGGAGGCT CGGTCGCGGC TGCGTCGGCC GCCGCCGCGT CGGCGGGGGC CCCCCGCGGG GATGTCGCCG GCGGTGTCAA GAGCAACATG CAGGGCATGG TCCTGAAGGT GATGGCCCAG CGCGGGAGCA CCGTCAGGAA GGGCGACACG CTCATCGTCC TCGAGGCGAT GAAGATGGAG AACCCCATCC CGAGCCCCCG CGACGGCACG GTCTCGGAGA TCTTCGTGGA CGCCGGGGAC GTCGTGCAGA ACGGCGACGT GCTGATGGTC ATTGAGTGA
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Protein sequence | MCAAKLDSLN ITDTTLRDAH QSLIATRLRT EDMLPLARAI DDVGFFSVEA WGGATFDSCI RFLNDDPWER LRVLKAELRR TPIQMLLRGQ NLVGYRHYPD DVVEKFVEAS ARNGVDIFRV FDALNDIRNM KKAMEEVKNV GAHLQGAISY TTSPVHSVAT FVEMAEELYT LGCDSICIKD MAGLIMPHDA RDLITGIKKT ADVRVCLHSH CTSGVAPLSY QAAIDAGVDI LDTAMSPFAL GTSQPPTESV VASVAGTARD TGIDLLPLRK VRNICRDMRG KYEPLFNSIA DRVDSDVLIY QLPGGMISNL VSQLKEQDAL DRLDEVLREI PRVREDLGYP PLVTPTSQIV GTQAVFNVLM DGERYRNVTK EVKDYVRGLY GRSPAPISPE IRRTIIGDEE PVTVRPADLL EPIYEQMKKE AEEQGLVTRD EDVLTYILYP SVAPSFLRGE RQPEAIPEKA AAGPAGVAEI PRSMEVEVDG EIFSVRIVTV EGGSVAAASA AAASAGAPRG DVAGGVKSNM QGMVLKVMAQ RGSTVRKGDT LIVLEAMKME NPIPSPRDGT VSEIFVDAGD VVQNGDVLMV IE
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