| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1624 |
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| Symbol | |
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| ID | 4846392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1633833 |
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| End bp | 1635896 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640116317 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001047535 |
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| Protein GI | 126179570 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCA AGTACGTATC GACGACATGC CCGTACTGCG GCACCGGGTG CGGGTTCAAC
CTTGTCGTCC GGGACGGCAA GGTCTTTGAC GTGGCGCACT GGCAGCGCGC ACCCGTCAAC
GGGGGCAAAC TCTGCCCCAA AGGACGCTAT GCCCATGAAT TCATAAACAG CCCCGACCGC
CTCACGAAAC CGCTGATCAA GAAGGACGGC GGGTTTGTCG AGGCGACCTG GGACGAAGCC
TACGACCTGA TCGCGGAGAA GATCGGTTCC TACAAACCCG ACGAGGTAGC CTGCCTCTCC
TCCGCCCGGA CATCGAACGA GGAGAACTAC CTGATGCAGA AGTTCGCCCG GGTGGTTCTC
AAGACCCCGC ACATCGACCA CTGCGCCCGG CTCTGCCATG CATCCACCGT CGCGGGCCTC
GCGGCGGTCT TCGGGTCAGG GGCAATGACC AACTCGATCA CGGACATCGC CGAGTCGAAG
TGCGTCTTCG TCCTCGGGTC CAACACATTC GAGCAGCACC CGCTCATAGC GCGGAGCATC
ATCCGTGCGA GAGAGGGCGG CGGGAAGGTG ATCGTCGCCG ACCCGCGCCT CACCCCCACC
GCGAAGCAGG CCGACCTCTA CATGCCGTTC ATATCGGGCA CCGACGTCGC GATCTTAAAC
GGCCTGATGC AGGAGATCAT CAGAAACGGC CGGGAGGATA AGGAGTTCAT CGCGAGCCGC
ACGAAGGACT TCGAGAACCT CAAGGAGGTC GTCATGAAGG ACGACTACAG CCTTGAGAAC
GTCTCGAAGA CCTCCGGTAT CCCCGTCGAG AGTCTCAGGA CCGCGGCCGA GTGGATCGCA
ACCGCCGACG TCGCCACGCT CATCTACTCG ATGGGCATCA CCCAGCACAC CGTCGGCGTC
GACAATGTCA AATCGACCGC CAACCTGATG ATGCTCACCG GCAACATGGG CAGGCCCGGT
GGCGGCGTCA ACCCGCTCCG CGGCCAGAAC AACGTCCAGG GCGCCTGTGA CATGGGAGCC
CTCCCGAACG TCTTCTCCGG CTACCAGAAG GTCACCGACG AGGCGGCGCA GAAGAAGATG
AAGGAGATGT GGGGCGTCGA CGAGCTTGCC GAGGGCAGAG TCGGCTACAC CGTCACCGAG
ATGGTCAACG TCCTCGCCGA CGAATCCGGC AAACTCAAAG CGATGTACAT CATGGGCGAG
AACCCGATGC TCTCCGACCC CGACCTCCAC CACGTCGAGG AAGGGCTCAA GAACCTCGAG
TTCCTGGTCG TCCAGGACAT CTTCCTGACC GAGACGGGCA ACTTCGCCGA CGTGGTGCTC
CCCGCCGCCT GCTACGCCGA GAAGGACGGC ACCCAGACGA ACACCGAGCG GCGTGTCCAG
CGCTGGAAGA AGGCCCAGGA CCCGCCAGGG GAGGCGAAGG AAGACTGGAA GATCATCTGC
GAACTCGGGA GCAAAATGGG TTATCCCGAG CAGTTTGCGT TCGAAAGTCC CGAAGCGATC
TTCAACGAGG TCGCCGCCGT CACGCCGTCC TACCACGGCA TGTCCTACGC CCGCCTCGAC
CCCGACGGTC TGCACTGGCC CTGCCCGACC GAGGAGCACC CGGGAACGCC GATCCTTCAT
AGGGAGAGGT TCGCCATGCC CGACGGGCTC GGGGTCTTCA GTCCGATCGA GTGGAAGCCA
CCTGCCGAGG TGCCGGACGC CGAGTACCCC TACGTGCTCA CGACCGGCCG CACACTCTGG
CAATGGCACA CTGGCACCAT GACCCGCCGG TCGTGGAGCC TCGAGAAAGA GGCGCCCATC
GGCTGGATCG AGATCAACCC CGAGGACGCA AAGGAACTCG GGATCGAGGA TGAAGAGGTC
GTCCGGGCGA GCACCCGGCG GGGCTCGGTC GAGATCCCCG CACGGGTCAC CCCCGAGATC
ATCAAAGGCG TCATGTTCAT ACCGTTCCAT TACAAGGAGC ACCCGGCGAA CAGGCTGACC
CACAATGCGC TTGACCCCGT AGCGAAGATC CCCGAGTACA AGGCCTGTGC CGTGAAGGTT
GAGAAGATCA CCGAGGAGGC CTGA
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| Protein sequence | MEIKYVSTTC PYCGTGCGFN LVVRDGKVFD VAHWQRAPVN GGKLCPKGRY AHEFINSPDR
LTKPLIKKDG GFVEATWDEA YDLIAEKIGS YKPDEVACLS SARTSNEENY LMQKFARVVL
KTPHIDHCAR LCHASTVAGL AAVFGSGAMT NSITDIAESK CVFVLGSNTF EQHPLIARSI
IRAREGGGKV IVADPRLTPT AKQADLYMPF ISGTDVAILN GLMQEIIRNG REDKEFIASR
TKDFENLKEV VMKDDYSLEN VSKTSGIPVE SLRTAAEWIA TADVATLIYS MGITQHTVGV
DNVKSTANLM MLTGNMGRPG GGVNPLRGQN NVQGACDMGA LPNVFSGYQK VTDEAAQKKM
KEMWGVDELA EGRVGYTVTE MVNVLADESG KLKAMYIMGE NPMLSDPDLH HVEEGLKNLE
FLVVQDIFLT ETGNFADVVL PAACYAEKDG TQTNTERRVQ RWKKAQDPPG EAKEDWKIIC
ELGSKMGYPE QFAFESPEAI FNEVAAVTPS YHGMSYARLD PDGLHWPCPT EEHPGTPILH
RERFAMPDGL GVFSPIEWKP PAEVPDAEYP YVLTTGRTLW QWHTGTMTRR SWSLEKEAPI
GWIEINPEDA KELGIEDEEV VRASTRRGSV EIPARVTPEI IKGVMFIPFH YKEHPANRLT
HNALDPVAKI PEYKACAVKV EKITEEA
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