| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1612 |
|---|
| Symbol | |
|---|
| ID | 4848363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1617517 |
|---|
| End bp | 1618290 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640116305 |
|---|
| Product | ExsB family protein |
|---|
| Protein accession | YP_001047523 |
|---|
| Protein GI | 126179558 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1606] ATP-utilizing enzymes of the PP-loop superfamily |
|---|
| TIGRFAM ID | [TIGR00268] conserved hypothetical protein TIGR00268 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.296662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGAG CTCGCGGGCT TGATGCACTC CTGAAATCGT ACGAACCTGT TGCGGTCGCG
CTCTCCGGGG GAACGGACAG TTCGGTTCTG CTGGCCCTCG CCCGGCATCA CGGGATTCAG
GTGATCGCGA TCAGCGTCGA TACCGGCCTT ACACCGCCGG GGGAGCTCGC GGCGGCGCGC
AAACTCTCGG AGCGTCTGGG TCTCCCACAC GTCGTGATAC CGCTCGATAT GCTCGATATC
CCCGCTGTCC GGGAGAACCG GCCGGACCGG TGCTACGTCT GCAAGCGGGC GATGATGGAG
GCGATCGTGG CGGAGGCACG CCGGCAGGGG TGCCGGACGG TGGTCGATGG GACCCACGCC
GACGATCGGC CTGCGGCGAG GCCCGGGATG CGGGTGCTCT CCGAACTCGG GATCAAAAGC
CCGTTTGCCG AGTGCGGTAT GGGGAAGGCG GATGTCGAGG CTCTTGCGAG GGAACTCGGG
GTGCCCGTCC GCCCGCCGTC CGCGTGCCTC GCAACCCGCA TCCCCACCGG CGAGGCGGTC
ACCCGGGAGT GCCTCGCGCT CGTCGCGGCG GCGGAAGCCC TCCTCGCGCG GGAGATCCCG
GGGACGATAC GGGTCCGGTG CAGTGGTGGT TGCCGGGCTT CCATCGAGGC CGACCCGGCG
TACCGCCGGA GGCTTGAGGA ACTGCTCGGT GCGGTGAAGG TACTCGGGTT TGCGGATGTA
ACGATTGCCT CCGGTGGCTA CCGGGAAGGA GGTGCGGATT CATGGAAGCG GTGA
|
|---|
| Protein sequence | MTRARGLDAL LKSYEPVAVA LSGGTDSSVL LALARHHGIQ VIAISVDTGL TPPGELAAAR
KLSERLGLPH VVIPLDMLDI PAVRENRPDR CYVCKRAMME AIVAEARRQG CRTVVDGTHA
DDRPAARPGM RVLSELGIKS PFAECGMGKA DVEALARELG VPVRPPSACL ATRIPTGEAV
TRECLALVAA AEALLAREIP GTIRVRCSGG CRASIEADPA YRRRLEELLG AVKVLGFADV
TIASGGYREG GADSWKR
|
|---|
| |