Gene Memar_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1606 
Symbol 
ID4846116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1611704 
End bp1613137 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content65% 
IMG OID640116299 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_001047517 
Protein GI126179552 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA GGTTACAGTC GATCATCGAT GGAATTGGGC CGATCAGGAA GGTCGGTGTT 
GTCGGCATGG GCTACGTCGG CATTCCCGCC GCGGCGCTCT TTGCGGACGC CCCCGAATTC
GAGTTCGTCC GCGGATTCCA GCGAGACTCC CCGTCCTCCG GCTACAAGAT AGCCATGCTG
AACCGGGGGG AGTCGCCGCT CAAGGGCGAG GAGCCCGGGC TCGAAGAGTT GCTCGCTAAG
GTCGTCGATG CGGGTAAGTT CCGGTGCACC CCGGACTTCT CCGGGGTTGC GGAGTGCGAC
GCGGTGACGC TCGCCATCCA GACACCGTTT AAGGATCCAA AAGACCTCAT CCCCGATTTC
TCGGCCCTGA CCGAGGGGCT CCGGCAGACG GGAAGGAACC TCTCGGAGGG CACGCTCGTG
GTGCTCGAGT CGACCGTCAC TCCCGGCACG ACTGCCGGGA TGGCCCGCAA GATCCTGGAA
GAAGAGTCCG GGCTCACCGC CGGCGAAGAG TTCTGCCTCG CGCACGCCCC CGAGCGGGTG
ATGGTCGGGC GGCTGCTCAG AAACATCCGG GAGCACGACC GGATCGTCGG TGGGATCGAC
GACGTCTCGA CGGCGCGGGC GATCGAACTC TACCGCCCAG TCCTCACGAC GGGAAAGATC
ATCCCGATGA CCGCGACCGC GGCCGAGGTG ACGAAGACCG CAGAGAATGC CTTCCGGGAC
CTCCAGATCG CCGCCGCAAA CCAGCTGGCG CTGCACTGCG AGGCAATGGG CGTCAACGTC
TACGACGTCC GGGCCGGGAT CGACTCCCTC AAGGGTGAGG GGATCACCCG GGCAATCCTC
TGGCCGGGTG CCGGGGTCGG CGGCCACTGT CTCACGAAGG ACTCCTGGCA CCTCGAGCGG
GGCGCACAGG TCCTCGGCGG CGACCTCTGG TACCCACACG GGGCCGAGTC GATCTTCGGC
GTCGCACGGA TGATCAACGA GTTCATGCCC CGGCACATGG TCCACCTGAC CCTCGAGGGG
CTCAAGCGGA CGGATAAGTC CCCGGAGGGT GCAACGGTCG CGCTCCTCGG ATGGGCGTTC
ATCCAGAACT CCGACGATAC CAGAAACACC CCCGCGGAGC CCTACCTCGC GGCGATGGAA
GAGGCCGGAG CGAAGGTCCG GGTCCACGAC CCGTTCGTGG AAAGGTATCC GGGGATAGAG
GTTTCGCACG ACCTGGACGC GGCTCTTGAA GGCGCGGACG TCGTCACCAT CTTCACCGGC
CACCACCACT ATGCTTCCCT CGATCCGGCG CGGGTGAAGG AGTTGTCGGG GAAAGAGCAC
CCGGTGATCG TCGACGGCAG GAACGCCGTC GATCCGGATG CGTTCATCCG GGCGGGCTTC
GTCTACAAAG GCATCGGTCG CGGCGACAGG AACAATCATC CGATCCGGGA GTAA
 
Protein sequence
MSSRLQSIID GIGPIRKVGV VGMGYVGIPA AALFADAPEF EFVRGFQRDS PSSGYKIAML 
NRGESPLKGE EPGLEELLAK VVDAGKFRCT PDFSGVAECD AVTLAIQTPF KDPKDLIPDF
SALTEGLRQT GRNLSEGTLV VLESTVTPGT TAGMARKILE EESGLTAGEE FCLAHAPERV
MVGRLLRNIR EHDRIVGGID DVSTARAIEL YRPVLTTGKI IPMTATAAEV TKTAENAFRD
LQIAAANQLA LHCEAMGVNV YDVRAGIDSL KGEGITRAIL WPGAGVGGHC LTKDSWHLER
GAQVLGGDLW YPHGAESIFG VARMINEFMP RHMVHLTLEG LKRTDKSPEG ATVALLGWAF
IQNSDDTRNT PAEPYLAAME EAGAKVRVHD PFVERYPGIE VSHDLDAALE GADVVTIFTG
HHHYASLDPA RVKELSGKEH PVIVDGRNAV DPDAFIRAGF VYKGIGRGDR NNHPIRE