| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1586 |
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| Symbol | |
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| ID | 4846309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1590449 |
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| End bp | 1592251 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640116279 |
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| Product | DNA topoisomerase VI subunit B |
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| Protein accession | YP_001047497 |
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| Protein GI | 126179532 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1389] DNA topoisomerase VI, subunit B |
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| TIGRFAM ID | [TIGR01052] DNA topoisomerase VI, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.760746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCTTG CTGAAGACCT CGCCAAACAG CAGCGGAGCA TCAGCGTCGC GGAGTTCTTC
GAGAAGAACA AGCACCTGCT CGGTTTCGAT TCCCCGACGC GGGGCATCAT CACCACCATT
AAGGAAGCGG TGGACAACGC GCTCGACGCC TGCGAGGAGG CGGAGGTGCT CCCCGACATC
TTCGTCGGCA TCAAAAAGGT CGACAACGAG GTCTACCGGA TAACGGTCGA GGACAACGGC
CCCGGCATCG TGCCGGAGAA CGTCCCCCTG GTCTTCGGGA AACTCCTCTA CGGCTCCCGG
TTCCACCAGA TCCGGCAGAG CCGCGGGCAG CAGGGTATCG GGATATCGGC GGCGGTGCTC
TACGCGCAGC TCACCACCGG CATCCCGACG CTGGTCGTCT CCCGGACGGG GGCGAAGGCG
AGAGCCCACC GGTTCGAGCT GCTGATCAGG ACCGAGACGA ACGAGCCGGA GATCATCAGC
CACGAGGAGA TCGACTGGGA CCGGACGCAC GGGACACGGA TCGAGATCCA GTTCAAGAGC
ACCCTTGCCG CGAAGAAGCG GCTGGTGGAC TACCTCCGCC TCACGGCGAT CGTCAACCCG
CACGCCCGGA TCACGGCCGA TATCGACGGC GAGATGACGG TGTTCGAGCG GGTATCGAAT
GAGGTCCCGC CGTGCCCGAA ACCCATCCTT CCCCACCCGC ACGGGATCGA GTTCGGCGCC
CTAAAAAGGA TCGCCGCCGC GAACACCGGG ACCGTCGAGG AGTTTCTCAT CGGTAGTTTC
TCCAAGGTCG GGAAGAAGAC CGCCGACGAG ATGATCGCTC TCGCCGGGCT CAAGCCCTCC
CGGAAGGTGA ACAAACTCGA GTCGGAAGAA CTCAAACGGC TCCTCGACGC CATGCAGGCC
GTGAAGGTCC CGGCCCCGCC GGCGCAGCAG TGCCTCTCCC CCATCGGCGA GGACCTGATC
TGCAAAGGGC TCGAGAAGGA GATCCAGCTC GACTTCATCA AGGCCCGCAC CCGCCCGAGC
ACCGTCTACG GCGGGCACTC GTTCATCATC GAGGCGGCGA TCGGCTACGG CGGCAAGGTT
CCCCCCGAGG GCACCGCCCA GCTCTTCCGG TTCGCAAACC GCGTCCCGCT CCTCTACCAG
CAGGGCGCCT GCGCGATCAC GAGCTGTGCC TCGCAGGTGA ACTGGAAGAG TTACGGCCTC
TCGCAGCAGG GTCTCCCCAT GGGGCCGGTG CTGATCATGG TTCACGTGGC GTCCACGAAC
GTTCCCTTCA CGAGCGAGAG CAAGGATGCG GTCGCGTCCA TCCCGGAGAT CGAGCGGGAG
GTCGTCCTCG TCCTCCAGGA ACTCGGCCGG GAGCTCAAGA CCTACCTCTA CCGGCGGGAC
AAGAAGAAGC AGCAGGACGA CCGGGCCCGG GCGATATGCT CGGTCATTCC CGAGATCGCC
GCAAAGGTGA GCGAGATCGT GGAACAACCC CTGGTGGACA CCTCCCCGAT CGAGGGGAAG
ATCATGCGCA AGGTCGTCGC GAAGAAACGG ACGGTCGACG GGAAGGTCCG TATCGACGTG
AACAACTACA CCGCGAAGGA AGTCACCCTC GTCCTCTACA ACCTCTCCCG CGATGCGGCG
GAAGACGCGA AGCCCCGGCC GGACTTCGTG GACAGTATGG ACGGGGAGTA CAACAAGGTC
TGGCGGTGCA CGCTCGACCC CGGTGAGGCC TGGCATATCG TCTACACGGG ATCGGGCGAC
GGTTCGGTCG ATCTGCGCGG TGTGGAGGAC GGCAGGAAAG TGGTGGTGGA TCTCGATGTC
TAG
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| Protein sequence | MVLAEDLAKQ QRSISVAEFF EKNKHLLGFD SPTRGIITTI KEAVDNALDA CEEAEVLPDI
FVGIKKVDNE VYRITVEDNG PGIVPENVPL VFGKLLYGSR FHQIRQSRGQ QGIGISAAVL
YAQLTTGIPT LVVSRTGAKA RAHRFELLIR TETNEPEIIS HEEIDWDRTH GTRIEIQFKS
TLAAKKRLVD YLRLTAIVNP HARITADIDG EMTVFERVSN EVPPCPKPIL PHPHGIEFGA
LKRIAAANTG TVEEFLIGSF SKVGKKTADE MIALAGLKPS RKVNKLESEE LKRLLDAMQA
VKVPAPPAQQ CLSPIGEDLI CKGLEKEIQL DFIKARTRPS TVYGGHSFII EAAIGYGGKV
PPEGTAQLFR FANRVPLLYQ QGACAITSCA SQVNWKSYGL SQQGLPMGPV LIMVHVASTN
VPFTSESKDA VASIPEIERE VVLVLQELGR ELKTYLYRRD KKKQQDDRAR AICSVIPEIA
AKVSEIVEQP LVDTSPIEGK IMRKVVAKKR TVDGKVRIDV NNYTAKEVTL VLYNLSRDAA
EDAKPRPDFV DSMDGEYNKV WRCTLDPGEA WHIVYTGSGD GSVDLRGVED GRKVVVDLDV
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