Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1579 |
Symbol | |
ID | 4848414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1583983 |
End bp | 1585320 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640116272 |
Product | MATE efflux family protein |
Protein accession | YP_001047490 |
Protein GI | 126179525 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAC TGACCGAGGG CGACCTCTTC CGGGGTCTTA TAACAATAGC GGCGCCTATC GTCGCCGGGA ACGTGCTGCA GAGCGGCCTC GAACTGGTCG ACCTTTTCTT CGTCGGCCGG CTTGGATCGG AGGCTATCGC GGGTGTCGCC ATGAGCACCT CCATCGTCAT GGTGCTCATG ACGATCATCA TCGGCATCGT CACCGCGAAC ACCGCCTTCG TCTCGCGCTA CTACGGGGCG AAGAACTACG ATATGGTAGC GAAGGGCGTC TCGCACACCC TCATCCTCGG GCTCGTATTC TCGATTCTCC TCAGTGTCGT GGGTATCCTC TACGCCGAGG ATATGCTCCT CCTCCTCGGC GCCGAACCGA ACGTTGCACT GCTCGGGGCT TCCTACCTGA CGGTCCTCTT TACCGGCAGC GTGACGCTGG TCGAGCTCTG GGTCATCAAC TCCTCGTTTC AGAGCTGCGG CGACGCCACG ACGCCGATGC TCCTCGTGGT TCTCGCGAAT ATCCTCAATA TCGCCCTCGA CCCGCTCCTG ATCTTCGGCT ACGGGGTAGT CCCCGCCTGC GGCGTCGCCG GGGCGGCCTA CGCCACCATC ATATCCCGGA GCGTGGCGTT CGCCATAGCG TTTGCCCTCC TGCTCTCGGG AAGGTCGCCG ATCCCCTTCT CGTTCCGGAC GAAGTTTGAG TTCTCGCTCG CGTGGAGGCT TATTCGGGTC GCCGTCCCGA ACTCCGTTCA GTCCGGGCTC AGGAGCGTGA CGTTCCTTGC GATGATGGCG ATCGTGGCGG TCTTCGGCAC GGCGGCCCTC TCCGCCTACG GCATTGTCGG CCGACTGGAA CTCGTCGCGC TCATGCCGGG GTTCGGGATC GCGACCGCAA CCGCCGTGAT CGTCGGCCAG AACCTCGGCG CGAAGAAACC CGAACGGGCG GAGGCGGGCG TGAGGCTCTC CGCGCTCATG AACAGCGGGT TCATGGCGCT CATGGGAGCG ATCTTCTACC TCGCCGCGCC CGCGATCGTC GAGGTCTTCG ACCCGAGCGG CGCGAGCACG GAGATCGGCG TCTCGTATAT GCAGACAGTC GCACCGTTCT ACGTCTTCCT CGCCGTCGCG ATCATCCTCG GGTTCGCGCT CAACGGGGCG GGGGACACGA AGAAGCCCAT GTATGCCACG CTCTTCTCCA TGGTCCTTTT CCAGGTCCCG CTCGCCTGCA TCCTCCCGGG TCTGCTCGGG ATCGGGATCG CCGGGGTCTG GCTTGCGGTG ATCTGCGGGA TGATCTTGCA GATGGGTATG CTCTTTGCGA TGTACCGGCA TGGGGGCTGG AAGTCGACGG TGATATGA
|
Protein sequence | MSELTEGDLF RGLITIAAPI VAGNVLQSGL ELVDLFFVGR LGSEAIAGVA MSTSIVMVLM TIIIGIVTAN TAFVSRYYGA KNYDMVAKGV SHTLILGLVF SILLSVVGIL YAEDMLLLLG AEPNVALLGA SYLTVLFTGS VTLVELWVIN SSFQSCGDAT TPMLLVVLAN ILNIALDPLL IFGYGVVPAC GVAGAAYATI ISRSVAFAIA FALLLSGRSP IPFSFRTKFE FSLAWRLIRV AVPNSVQSGL RSVTFLAMMA IVAVFGTAAL SAYGIVGRLE LVALMPGFGI ATATAVIVGQ NLGAKKPERA EAGVRLSALM NSGFMALMGA IFYLAAPAIV EVFDPSGAST EIGVSYMQTV APFYVFLAVA IILGFALNGA GDTKKPMYAT LFSMVLFQVP LACILPGLLG IGIAGVWLAV ICGMILQMGM LFAMYRHGGW KSTVI
|
| |