Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1572 |
Symbol | |
ID | 4845979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1575631 |
End bp | 1578222 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640116265 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001047483 |
Protein GI | 126179518 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.330125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCCGT CACATCAACT ACCCAAAAAC TACGATATCG AAGAAGTGGA GACGCGCTGG CAGGATACCT GGCGGGATGA GGACAACTAT TTCGACCCCG CCTCGTCGAA ACCACGGTTC ATCATCGACA CGCCGCCGCC CTATCCCACC GGGAACTTCC ATATCGGGAA CGCGTTAAAC TGGTGCTATA TCGACTTCAT CGCGCGGTAC AAGCGCATGC GCGGCTACAA CGTCATGTTC CCGCAGGGGT GGGACTGCCA CGGCCTCCCG ACCGAGGTGA AGGTCGAGGA GACCTACGGG ATCACCAAGA ACGATGTACC GCGGGAGAAG TTCCGGGAGA TGTGCCGCGA CCTCACGCTT TCAAATATCG AGAAGATGCG GGCGACCATG CGGCGGCTTG GGTTCTCGAC CGACTGGAGC CACGAGTACA TCACCATGCT CCCGGACTAC TACAGAAAGA CCCAGGCGTC GTTTTTGCAG ATGCTCAAAG CCGGCGACAT CTACCAGAGC GAGCATCCGG TGAACTTCTG CACCCGGTGC GAGACGGCCA TCGCGTTCGC CGAGGTCAAC TACGCGCCCC GCACCACCAA ACTCAACTAC TTCGACTTCG ACGGCGTCGA GATCGCCACC ACCCGGCCCG AGCTGCTCGC GGCCTGCGTT GCCGTGGCCG TCCATCCCGA AGACGAGCGG TATCGCGGGA TGAAGGGGAA GAGGCTCACC GTCCCGATCT TCGGTCACGA TGTTCCGGTC ATCGAGGACG TCGCGGTCGA CCCGGAGTTC GGCAGCGGCG CGGTGATGAT CTGTACGTTC GGCGACAAGA CGGACGTCTA CTGGTGGAAA CAGCACGGCC TGGACCTCCG CAAGGCTATC GACCGGCAGG GCATCATGAC CGCAACCGCG GCCCCCTATA CGGGGATGTC GTCTGAGGAC TGCAGGGAAG CGATCCTCGC CGACATGGAG AAGGCCGGGA TCCTGAAGCG GCAGGAGGAA CTCGAGCAGC GGGTGGGGAC CTGCTGGCGG TGCAAGACCC CGATCGAGAT CCTCTCGGAG CGGCAGTGGT TCGTCCGGGT ACACCAGGAC GAGATCCTGG AATCGGCGCG GAGGGTCTCC TGGACACCGG AGCATATGTT CGCCCGGATG GAGAACTGGG CGAACTCCAT GGAATGGGAC TGGTGCATCT CCAGGCAGCG GATCTTCGCG ACCCCTATCC CCGTCTGGTT CTGCACTGCC TGCGGCGAGA TGGTCATCCC GGCCGAGAAA GACCTCCCGA TCGACCCGAC GGTCGATAAG CCGAAGGCAC CCTGCCCGAA GTGCGGGGGA TCGGACTTCA CCGGCGAGAC GGACGTGCTC GACACCTGGA TGGACTCCTC GATATCGGTG CTCCACGTCA CCGGGTGGGA CGGAACCGGC AAACCTCCGT TCTTCCCGGC GCAGATCCGC CCTCAGGGAC ACGATATCAT ACGGACGTGG GCGTTCTACA CCATCCTCCG GGCGAAGGCG CTGGTCGGCG GCCACCCCTG GGACGAGATC CTGGTCAACG GGATGGTCCT CGGGGAAGAC GGGTTCAAGA TGAGCAAGAG CCGGAGCAAC ATCATCTCTC CCGAGGCGAT CGTCGGGGAT TACGGCGCGG ACGCGCTCCG GCAGTGGGGC GCCGGGGGTG CCGCCACCGG TTCGGACATC ATGTTCAACT GGAACGACGT CGTCGCGGCG TCCCGGTTCC AGACCAAACT CTGGAACATC TTCCGGTTTG TGATGGGACA CCTGGAGAAG GGGGCCGATC CCGATGCACC GGTGACGGAA CTCACCGACC GGTGGCTGCT CGTCCGGCTC TCCGAGACCG TGGCGGAGGT CACCGCCGCG ATGGAGGGCT ACCAGTTCGA CCGGGCGCTC AGGGCGATCC GGGAATTTGC CTGGAACACG CTCGCCGACG ACTACATTGA GATCGTGAAA GGCCGGCTGT ATGCGGCCGA CAGCAGCAGG GCCAGTGCCT GCAGCGCGCT CCGGATGACG ATGGACGTCC TCTGCCGCCT GCTTGCCCCG ATCATCCCGC ACTTCGCGGA AGAGTGCTAC CATAACCTCG CCGGCGAGAG CGTGCACAAA GAAGCCTGGC CGGACTTTTC ATACGCCGAC GACGAAGCGC GGCGCCACGG CGATCTCCTC GTGAAGACGG TCGCCGAACT CCGGCGCTAC AAGCATGATA AGGGCATGGC ACTGAACGCC CCGCTCGGCC ACGTCATGAT CTACGCGCCG GAGCCGGTCG ACGACGCCGG CGACGCCGGA CGTGCCCTCA ATGCCGATGC GCGCTGGAGC ACCGGCACGC CCCGGCTCGA GGAGGTCGTG AGCGGCGTGG ACTTCAATAT GGCGGTCATC GGCCCGGTGC TCAGGAAGCA GGCCCGCGGG TTCATGCAGG CAGTGGAGGC GCTCCCGCCG GAACTGCTCA AGAACCCGCC TGCGACCGTG ACGGTCGCAG GCGAGGATAT TCCGGTTCCG GCCAATTCCT TCACGCCGAA GGTCGCCTAC CGGGTGGCGG GAGAAGAGGT GGACGTCCTC ACGCTCGGGG ACGTCGTCGT GACGATCGGG CACCAGCCCT GA
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Protein sequence | MSPSHQLPKN YDIEEVETRW QDTWRDEDNY FDPASSKPRF IIDTPPPYPT GNFHIGNALN WCYIDFIARY KRMRGYNVMF PQGWDCHGLP TEVKVEETYG ITKNDVPREK FREMCRDLTL SNIEKMRATM RRLGFSTDWS HEYITMLPDY YRKTQASFLQ MLKAGDIYQS EHPVNFCTRC ETAIAFAEVN YAPRTTKLNY FDFDGVEIAT TRPELLAACV AVAVHPEDER YRGMKGKRLT VPIFGHDVPV IEDVAVDPEF GSGAVMICTF GDKTDVYWWK QHGLDLRKAI DRQGIMTATA APYTGMSSED CREAILADME KAGILKRQEE LEQRVGTCWR CKTPIEILSE RQWFVRVHQD EILESARRVS WTPEHMFARM ENWANSMEWD WCISRQRIFA TPIPVWFCTA CGEMVIPAEK DLPIDPTVDK PKAPCPKCGG SDFTGETDVL DTWMDSSISV LHVTGWDGTG KPPFFPAQIR PQGHDIIRTW AFYTILRAKA LVGGHPWDEI LVNGMVLGED GFKMSKSRSN IISPEAIVGD YGADALRQWG AGGAATGSDI MFNWNDVVAA SRFQTKLWNI FRFVMGHLEK GADPDAPVTE LTDRWLLVRL SETVAEVTAA MEGYQFDRAL RAIREFAWNT LADDYIEIVK GRLYAADSSR ASACSALRMT MDVLCRLLAP IIPHFAEECY HNLAGESVHK EAWPDFSYAD DEARRHGDLL VKTVAELRRY KHDKGMALNA PLGHVMIYAP EPVDDAGDAG RALNADARWS TGTPRLEEVV SGVDFNMAVI GPVLRKQARG FMQAVEALPP ELLKNPPATV TVAGEDIPVP ANSFTPKVAY RVAGEEVDVL TLGDVVVTIG HQP
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