| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1563 |
|---|
| Symbol | |
|---|
| ID | 4846679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1569019 |
|---|
| End bp | 1570116 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640116256 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047474 |
|---|
| Protein GI | 126179509 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1980] Archaeal fructose 1,6-bisphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGA CCACCGTGTC CGTAATTAAA GCAGATATAG GCAGTTTCCC GGGGCACTCC
CGAACCCACC CGAAGATCCT TGAGGTGGCC GCCCGGAGAC TCAAGGAAGC GGAAGGAAGC
ATCCTCATCG ACTCGTACGT CACCCACTGC GGTGACGATC TCGAGTTGAT CATGACGCAC
ACCAAAGGGG AGGACAATGA AGAGATCCAC AAGCTGGCGT GGGATATCTT CATGGAGTGC
GCCGGACTCG CCAAGGAGAT GAAACTCTAC GGCGCCGGGC AGGACCTGCT CGGAGATGCG
TTCAGCGGCA ACGTCAAGGG GATGGGACCC GGTGTCGCCG AGATGGAGTT CGAAGAGCGG
GGTTCCGACC CGATCCTGGT CTTCATGGCC GACAAGACCG AGCCGGGGGC GTGGAACTAC
TTCCTCTACA AGATATTCGC CGACCCCTTC AGCACGTCCG GCCTCGTCAT CGACCCGTCG
CTGCACGATG GGTTCACCTT CGAGGTCCAC GACGTCATAA AGAAGCGCAA GATCCTCTTC
AACACGCCCG AAGAGTCCTA CAGCCTCCTT GCCTATATCG GAGCGCCGAG CCGCTACGTC
ATCAAGTACG TCTGGAAGAG AAACGGCCTG ATAGGGGCGT CCACCAGCAC CCAGCGGCTG
AACCTGATGG CCGGGCGGTA CGTCGGCAAA GACGACCCGG TCATGATTGT TCGGGCACAG
AGCGGATTCC CGGCGGTGGG CGAGGTCATC GACCCCTTCA GGACGCCCAT CCTCGTGGCC
GGCTGGATGC GGGGCTCGCA CCACGGACCG TTCATGCCCG TCGGCGTCTG CGACGCAAAC
TGCACCCAGT TCGACGGACC GCCCCGGGTC ATCTGCCTCG GGTTCCAGGT CTGCAACGGA
AAGCTGATTG GGCCTGCCGA CATGTTCGAC GACCCGGCGT ACAACCGCGT CCGCGACCAG
TGCTGCGAGC TCTCCAGCTT GCTCCGGGCT CACGGGCCGT TCGAACCGCA CCGCCTCTCG
CTCGAGGAGA TGGAGTACAC CACCCTCCCG GGCGTCGAGA AGCAGTTCAA GGATCGCTGG
GAAGACCTTC CCGAGTAA
|
|---|
| Protein sequence | MVKTTVSVIK ADIGSFPGHS RTHPKILEVA ARRLKEAEGS ILIDSYVTHC GDDLELIMTH
TKGEDNEEIH KLAWDIFMEC AGLAKEMKLY GAGQDLLGDA FSGNVKGMGP GVAEMEFEER
GSDPILVFMA DKTEPGAWNY FLYKIFADPF STSGLVIDPS LHDGFTFEVH DVIKKRKILF
NTPEESYSLL AYIGAPSRYV IKYVWKRNGL IGASTSTQRL NLMAGRYVGK DDPVMIVRAQ
SGFPAVGEVI DPFRTPILVA GWMRGSHHGP FMPVGVCDAN CTQFDGPPRV ICLGFQVCNG
KLIGPADMFD DPAYNRVRDQ CCELSSLLRA HGPFEPHRLS LEEMEYTTLP GVEKQFKDRW
EDLPE
|
|---|
| |