| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1561 |
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| Symbol | |
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| ID | 4846288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1565610 |
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| End bp | 1568036 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116254 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001047472 |
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| Protein GI | 126179507 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAATA CCGAATCCAT TGAAGTGACC ATCAAGGAGG CGGCTCACGA AGACGCCGGA
CGGGGAATTG CCAGACTGAG CATCGACACC ATGAAGGCGC TTGGCCTCGT CAGCGGCGAC
GTCGTCGAGG TCGAGGGGCG CCATAAGGCA GCGACGCTCG TCTGGCCCGG TTTCCCCCAG
GACACCGGCA AGGCGGTCCT GCGCATCGAC GGCAACACCC GGAGCAACGT CGGATCAGGG
ATCGACGACA ACGTCCGGAT CAGAAAGACC GAAGCGGGAT ACGCGAAGAA GGTGACCATC
CAGCCGACCC AGCCCATCCG CCTGATGGGC GGCGAGCAGT ACCTGGGGAG GATCCTCCGC
GGCAGGCCCG TCACCGAGGG GCAGCTCATC CGCGTCAACA TCCTCGGCAA CCCGCTTACG
TTCGCGATCG CCAGGGTTGC ACCGAAGGGC ATCGCCATCG TCACCGACAG CACCGAGATC
GAGCTGAAAG AGACTCCGTA CGAGCCCAAG GAGGGGCGAC GCGAGACGGC GGCGGCCGAC
GTCCACTACG AGGACATCGG CGGGCTCGAC CGCGAGCTGC AGCTCGTCCG GGAGATGATC
GAACTCCCGC TCCGGCACCC CGAACTCTTC GAACGCCTGG GCGTCGAGCC CCCGAAGGGC
GTCCTGCTCT ACGGCCCGCC CGGCACGGGA AAGACCCTGA TCGCAAAAGC GGTGGCGAGC
GAGGTGGACG CGCACTTCAT CACGCTCTCG GGGCCCGAGA TCATGAGCAA GTACTACGGC
GAGTCCGAAG AACGCCTGCG GGAGGTCTTT GAGGAGGCGC AGGAGAACGC GCCCTCGATC
GTCTTCATCG ACGAGATCGA CTCGATCGCG CCCAAGCGCG AAGAGGTGAA AGGCGAGGTC
GAGCGCCGGA TCGTCGCCCA GTTGCTCGCC CTGATGGACG GGCTGAAGAC CCGGGGCCAG
GTCGTGGTTA TCGCCGCGAC GAACCTCCCG GACATGATCG ACCCTGCTCT GCGGCGCGGC
GGCCGGTTCG ACCGCGAGAT CGAGATCGGC ATCCCCGACA CGAAGGGGAG GCAGCAGATC
TTCCAGATCC ACACACGCGG CATGCCGCTT GCCGAGGACG TGAGACTCGA CGATTACGCC
CGTTCCACAC ACGGTTTCGT CGGCGCCGAC ATCGCCCTGC TCGCAAAGGA GGCGGCGATG
CACGCACTCC GCCGGATCAT CCCGCATATC AAGATCGAAG AAGAGATCCC CGCCGAGATC
ATCGACCAGC TCCGCGTCAC GAACGAGGAC TTCATCGAAG CGCACAAGCA CGTCGAGCCG
AGCGCGATGC GAGAGGTGCT CGTAGAGATC CCTGATGTCA AATGGGAGGA CGTCGGCGGG
CTCGAAGACG TAAAGGGGGA ACTTGCGGAA GCCGTTGAGT GGCCGCTCAA ATATCCGGAG
ATATTCGCGT CGCTCGAGAC CGAACCCCCC CGAGGCATCC TGCTCTTCGG CCCCCCCGGA
ACAGGCAAGA CACTCCTTGC AAAGGCGGTC GCAAACGAGA GCGAAAGCAA TTTCATCTCA
GTAAAAGGCC CGGAACTCCT CTCGAAATGG GTGGGAGAAT CGGAACGCGG AGTTCGGCAG
GTATTCAGGA AAGCGAGGCA AGCAGCACCG TCGATTATCT TTTTCGACGA GATTGATGCG
CTTATGCCCA AACGTGGATC TTATATAGGA TCATCGCACG TAACTGAAAG TGTGGTAAGC
CAGATCCTGA CAGAGCTCGA CGGCCTCGAA GAACTCAACA ATGTCGTGGT TCTCGGCGCT
ACCAACCGCC CGGACATGTT GGACGAGGCG CTGCTTCGCC CCGGCAGATT CGACCGGATC
ATCTACGTCC CGCCGCCCGA CAGGGAAGGC AGGAAGAAGA TCTTCGAGGT GTACCTGAAA
AACAGGGAGA TCCTTGCAAA CGACGTGGAC ATCGAGGAAC TGGTCGACAG AACCGAGGGC
TACGTCGGCG CCGACATCGA GGCGCTGGTC CGCGAGGCAA AGACTTCCGC CATGCGCGAG
TTCATCGCCG CAATGGGAGG GAAGACCGAA GAGGAACGGC GTCAGGCGAT CGGCAACGTA
AGGATCACGA AGAACCACTT CGACGACGCC CTCTCCCGCG TGAGAGGCAC GCTCGATATC
GACCGGCTGG AGGAGAACGA ACGCCACTCC TGGCAGATCC TCTACAACCA GGAGCAGCGG
TCGGCACTCG AAGATGCCGT CTCGACCATC AACCGTGCAG GAATGCGGGA GACGGGAAAG
ATCGAGCAGG AAGTCAAAGA TCTCACGCAG GCCCTCAAAG ATGCGGTCTA CCAGAGGAAG
AAAGACTTCG GCGAGATCAA GCGGCTCACA AAGGAGTTGA AGGCAAAATT AGAACGTCCG
CTGCCCCAGA CGGGCATGGC GTTCTGA
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| Protein sequence | MANTESIEVT IKEAAHEDAG RGIARLSIDT MKALGLVSGD VVEVEGRHKA ATLVWPGFPQ
DTGKAVLRID GNTRSNVGSG IDDNVRIRKT EAGYAKKVTI QPTQPIRLMG GEQYLGRILR
GRPVTEGQLI RVNILGNPLT FAIARVAPKG IAIVTDSTEI ELKETPYEPK EGRRETAAAD
VHYEDIGGLD RELQLVREMI ELPLRHPELF ERLGVEPPKG VLLYGPPGTG KTLIAKAVAS
EVDAHFITLS GPEIMSKYYG ESEERLREVF EEAQENAPSI VFIDEIDSIA PKREEVKGEV
ERRIVAQLLA LMDGLKTRGQ VVVIAATNLP DMIDPALRRG GRFDREIEIG IPDTKGRQQI
FQIHTRGMPL AEDVRLDDYA RSTHGFVGAD IALLAKEAAM HALRRIIPHI KIEEEIPAEI
IDQLRVTNED FIEAHKHVEP SAMREVLVEI PDVKWEDVGG LEDVKGELAE AVEWPLKYPE
IFASLETEPP RGILLFGPPG TGKTLLAKAV ANESESNFIS VKGPELLSKW VGESERGVRQ
VFRKARQAAP SIIFFDEIDA LMPKRGSYIG SSHVTESVVS QILTELDGLE ELNNVVVLGA
TNRPDMLDEA LLRPGRFDRI IYVPPPDREG RKKIFEVYLK NREILANDVD IEELVDRTEG
YVGADIEALV REAKTSAMRE FIAAMGGKTE EERRQAIGNV RITKNHFDDA LSRVRGTLDI
DRLEENERHS WQILYNQEQR SALEDAVSTI NRAGMRETGK IEQEVKDLTQ ALKDAVYQRK
KDFGEIKRLT KELKAKLERP LPQTGMAF
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