Gene Memar_1544 details

Gene Information

• Locus tag: Memar_1544
• ID: 4848147
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1551034
• End bp: 1551513
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640116237
• Product: putative CheW protein
• Protein accession: YP_001047455
• Protein GI: 126179490
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0835] Chemotaxis signal transduction protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0974613
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGCAT CCGTAGACGT GGTGGAGTTC CAGCTCGGGG AGGAGCACTA CGCACTGGAT 
ATCCAGATTG CACGAGAGAT CGTGGAGATG ATGCCGATCA CTCCCCTTCC CCGTGCTCCC 
GACTACCTCG CGGGCATCAT TAACCTGCGA GGCGAGATCA CGAACATCAT CGACCTTCGC 
GATCTTCTCG GGCTCCCTGC ATCGGAGGAG GTCGAGAACC GAAAGATCGT CGTGCTGATG 
CCGGACGTGA CGAACGGGTC GAACGTAGGG ATCATCGTCG ACGACGTTCA CAGTGTCGTG 
TCGGTCAGAA ACGACCAGAT CGAACGCGTC AGCGACGGCA TCACGTCGTC CATCAGCAGT 
TATGTCAAGG CAATCATCAA GATAGGGGAC GAAGAGGAAG AGAAGACAAA GACTCTTATC 
ATCTGGCTCG ACGTCCAGAA AGTAATCGGC GATCTCGGCG GCGATCTCGG AAACCACTAG 

 

Protein sequence

MAASVDVVEF QLGEEHYALD IQIAREIVEM MPITPLPRAP DYLAGIINLR GEITNIIDLR 
DLLGLPASEE VENRKIVVLM PDVTNGSNVG IIVDDVHSVV SVRNDQIERV SDGITSSISS 
YVKAIIKIGD EEEEKTKTLI IWLDVQKVIG DLGGDLGNH