| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1531 |
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| Symbol | |
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| ID | 4846822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1533826 |
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| End bp | 1538064 |
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| Gene Length | 4239 bp |
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| Protein Length | 1412 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640116224 |
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| Product | HEAT repeat-containing PBS lyase |
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| Protein accession | YP_001047442 |
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| Protein GI | 126179477 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1413] FOG: HEAT repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0731666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCATCG AGGCCCGACG AGCATTCCCG GACAGCCAAT CCGCCGATCC GGCAGCCGGA
ATCCGCGATG TAATGATGGT GTTGCCGGTA TCTGCGGGCG GGTGCGTGCC CGGACCCGGT
GACAACCGTT CGCCGTCTCA GACGTTACGT TACCTGATCT GCGCAATCTT CGGGATCATA
TGCCTTCTCC TCCTGTCCGG TGCGGGGATG CCGGGTATGC CGGCGATTGA ATCCGTATGC
CCCATCGTGG CTCTGCCCGG GCTCTTCGGA CCGAACGGCT CTTCGCTTAT CAGGCACTGG
ATAAAGAGAG ACGTCGAAGA GAGCGATGAA GAGGACGACC CAAAACCCCG GGTTGCCGGT
GTGTCCGTCG AGGCACCCCG GGACGGGCAT GTCCCGGCCG ACGATAGGAC GAGCGTCCTT
GTGAGGCTTG AGAATGTCCC CGATGCCCTC CAGCGGTTCG ATGTTCTCGT TTCGCCGGAC
GGGACGGCTG CCGCCCCTTC CCCGGCAGAG CCTCCCGTGG ACTTCGCCTC CCCGGACGAG
ATCGATGCTC CCGTCCCGGC GGAGGGAGCA GAGGCTGAAG GAGTCTTCCC TGACTTTTCT
CTCCCGGATG AACCGCCGTC GCTTGCTTCC GACGACCTGC CTGCCCCGTA TCCCGGCTCC
CTCAGCGACG AAGAACTCAT GCAGATTCTC GAGTTCGACG ATGACGCCTC CTCGCCCGGG
ATCGCCGAAC TCGATCCAGA AGAGGAAGAG CCGGCGCCCG TGGCCGCCGG GAGCGATGAA
CGCCCGATCG AGTCGCTCAT CGACGACCTC GGCAGTGACG ATGCCGGGGT TCGCGGCCGT
GCCGTCGGGG CCATCGCAGA ACGTGGGGCA GACGCCGTAG AACCCCTGGT TCGGGCCCTC
GCTCTTGCGG ACGACCGGCA GCGGTGGTGC GTCGCCGAAG CCCTCGCCCT GATCGGGGAG
GATTCGATCC CTGCGCTGAT TGCTGCGCTC GGGGACAGTA CGGCGCAGAT CGGGGCGGCA
GCCACGCTCG TGCGTATCGG GAGTCCCGCC GTGCCGCCTC TCATCGCGGC ACTTGCCGGC
GATGACGGCG AGGTGCAGTT CGGTGCCCGC TACGCGCTCC GGGAGATCGG CGACGAGGCA
ATCCCCTCCC TTATCGAGGC TCTCTGTGCG CCTGAGCGGA GCATCCGGAG GTCGGCGGCC
TCCGTTCTCC GGGAACTCGG GTGGAAGGCC CCCGACGACG CCGGCGCGAT ACGCTACCTC
GTCGCCGACG AAGCGTGGCT CGATGTCGCG GATTACGGGG AAACTGCGGT CGAACCCCTC
ATCCGCATCC TGAAGTCCCC CGACAGGGAG GTGTGGTGGA ACGCCGCCCG GACTCTCGGG
GAGATCGGCG GAGCCGCGGT CGATCCCCTG GTCGAGTTTC TACACGAGGC GGACGATGAT
ATCCGCCCGC TGGCGGCCAT GGCGCTCACG GAGATCGGTT CTCCTGCGGT CGAACCGCTC
ATCGGTATGC TCTCTGTCCC CTCCCTCCGC GGAACGGCGG CGGCGGCCCT GGTGAAGATC
GGCGAACCGG CGGCGGAGGC GTGCATCCGT GCCCTGGACT CCACGGACGG GGAGGCACAG
GAAACGCTTC GGAACGTTCT CGGTGCGCTC GGCGAGCCGG CGGTGCCGGC CCTGATCCAG
TCGCTGACGT CCGGGCAGTC CCGTATCCGG TCCCGGGTAG CCGAAATTCT CGGCAGGATG
AACTGGGAAC CCTGGAACGA CACCGAGCGG GCATGGTACC TGATTGCCCG GGAGGAGTGG
ATGGAACTTG CCCGGATGGG CCCGCCGGCC GTCGAGCCGC TGATCCGGAC GCTCAACGGC
GACGACGACC GTATACGCTG CGAGGCTGCG GCGACACTCG GCGAGATCGG CGATCCGGCG
GCGCTAGGCC CGCTCGTGGA TGCCCTCGCC GACGAGACCG TCGCCCCGGT GGCGGCGGAT
GCGCTCGTTG CCATCGGAGA ACCGGCCGTG GCGCCCGTTC TCGAGGTGCT CGAAGATGGG
GCCGGGGCCG CCCGGGAGAA CGCCGTCGAG GTTCTGGGCA GGCTCGGGAC GCCCGAAGCG
GTTCCGGCTA TCGTCGAATT CGTCAGGACC GGCGAGGACC GCCTTCACCG GAAGGCCGTC
GACGCCCTGA TCGGGATCGG TGCGCCCGCG GTAGACGCCC TCATCCCCCT CCTCGGCGAG
GAGGGCGACG GGCAGGCGGG AGCGACGGCC GCTCTCACCG GGATCGGCGA TCCGGCACTC
GAACCGCTTG CCGGGGCACT CGACGGCGAG AATTCGTCGA TCCGGATGGG AGCCGCAAGG
GTCCTCGAGA AACTCGAGTG GGCTCCCGAA GGGGGGGCAG AGGAGGAGAT CGTCTACCTG
ATCGCGCTGC AGCGATGGGC GGAGATCGTG GAGCTCGGTG CTCCTGCCGT CGATCTCCTG
ACGGCACGGC TCGGCGACCT CGATGAGGCG GTGCAGGCCG GGGCGATGGA GGCGCTGGTC
GGCATCGGCG CTCCTGCGGT CCCCTCCCTG ATCCGCCTGC TCGGCAGAAA GGCGCTCCGC
GAACCGGCGG AAGAGACGCT TGTCAGGATC GGCGAACCGG CGGTGGAACC GCTGATCGAG
GCCCTGGACA AGACCCGGCT CCGCAAAACG GCCGCCGGCG TGCTGGTCAG GATCGGGAGA
CCCGCAGCCG GTGCGCTCGT CCCGGTTCTC GGGCATCCCG AGATCGGGCA GACGGCAGCC
GGGATATTCG AGGCGATGGG GGAGGCGTCC TTCGATGCGC TGGTCGAGGC GCTCGGGAAC
GACGACGCCC TGATCCGGCA GCGGGCGGGA GATGTGCTCG CCGGTCTCGG GGAAGCGGCT
GCGCCCCCGC TCATCGGGGC GCTGGGGCAT CCCGACGATA CCCTCAGGCT CGGGGCGATC
GATGCCCTCA CCCGATTCGG GGACCCGGTC GTCGATCTGC TTACGCAGGC GCTCAACGAT
GAACGCTACC TGGTCCGGCT GGGTGCGGCC GAGGTTCTCG GCAGAGCCGG ATGGGAGCCG
CAGACCGAAA GCGAGACCGT CTGGTACCTG ATCGCGAAGG AGCAGTGGGC TTCCGTCGCC
GGGATCGGGC CCGGTGCGGT CGAACCGCTG ATCCGGACGC TCAACGATCC CGACAGCGCG
GTCCAGGTAG GTGCGGCACG TGCGCTCGGG ATGATCGGGG GGCCTGCAGT CGCGAGGCTG
ATCTACGAAC TCCGGACAGA GCAGGACGGC ACGCAGAGAA AGGCAGTCGA AGCGCTCAAG
ATGATCGGCG AACCGGCGGT CATCCCGCTC ATCGACGCAC TCCAGGACCG CGACTGGCAG
ATCCGCCTGG GTGCGGCGCG GGCTCTCGTC GGTATCGGCG ATCCGGCCGT CGAACCGCTG
GTCCGGGCGC TCCGCGCCGC TCCCCCGGCA ATCAGGATGG GAGCGGCCGC GACGCTCGGC
AAGATCGGGA ACCCGGCGGC CATCGAACCG CTGACCGATG CGCTCCTGCA GGATGACTGG
CGCCTGGGGC GCGTCGTGGT GCGGGCGCTC GGCATGATGG GCGAGCCGGC GGTCAGGCCG
CTCCTGCGCG TCCTCAGGGA CGGGAACGAC GCGTCCCGGA AGAGCGCGGT GGCGGCGCTC
GTCCTGATCG GCGAGCCGGC GTGCCGTCTG CTCCCCGGTG CGCTCACGGA CGAGCATTTC
CGTGTCCGTG CCGGGGTCGC GGACGCTCTC GACCGCCTGG AATGGTCGCC CGCAACGGGA
GAGGAGGCGG TCGTCTACCT GATCGCAAAG GAACGATGGG GTGATCTCGC CCGGGCGGGA
CCGATCGCGG TCGAACCGCT GTTCGCGGTG CTCGACGACC GCGACGACAG TATCCGGCGG
CGGGCGGCGA AAGTCCTCGG GGAGATCGGC GACCCGCGTG CGGTTCCGGG GCTCATGAAC
CTCCTCCACG ACGACTACTA CAGCGTTCGG CGGGAGGCCG CAGCGGCAAT CGTCGCCATA
GGAGCCCCTG CGATGGAGCC GGTCGTAGCC GCACTCGACG ACCCGGACGG CGATGTCCGG
AAACGTGTGG CGGACGTGCT CGCCGAGATC GGGGATGCAC GGGCGATTGC GTCCCTCGAG
GGCATCTTCG ACGACGAGGA CTGGTATGCC CGGAAAGCCG CCGAGAACGC GGTGGAGAGG
ATCCGGGCAC GGACTGAAAA TGAGACCGGC GACCTGTAG
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| Protein sequence | MCIEARRAFP DSQSADPAAG IRDVMMVLPV SAGGCVPGPG DNRSPSQTLR YLICAIFGII
CLLLLSGAGM PGMPAIESVC PIVALPGLFG PNGSSLIRHW IKRDVEESDE EDDPKPRVAG
VSVEAPRDGH VPADDRTSVL VRLENVPDAL QRFDVLVSPD GTAAAPSPAE PPVDFASPDE
IDAPVPAEGA EAEGVFPDFS LPDEPPSLAS DDLPAPYPGS LSDEELMQIL EFDDDASSPG
IAELDPEEEE PAPVAAGSDE RPIESLIDDL GSDDAGVRGR AVGAIAERGA DAVEPLVRAL
ALADDRQRWC VAEALALIGE DSIPALIAAL GDSTAQIGAA ATLVRIGSPA VPPLIAALAG
DDGEVQFGAR YALREIGDEA IPSLIEALCA PERSIRRSAA SVLRELGWKA PDDAGAIRYL
VADEAWLDVA DYGETAVEPL IRILKSPDRE VWWNAARTLG EIGGAAVDPL VEFLHEADDD
IRPLAAMALT EIGSPAVEPL IGMLSVPSLR GTAAAALVKI GEPAAEACIR ALDSTDGEAQ
ETLRNVLGAL GEPAVPALIQ SLTSGQSRIR SRVAEILGRM NWEPWNDTER AWYLIAREEW
MELARMGPPA VEPLIRTLNG DDDRIRCEAA ATLGEIGDPA ALGPLVDALA DETVAPVAAD
ALVAIGEPAV APVLEVLEDG AGAARENAVE VLGRLGTPEA VPAIVEFVRT GEDRLHRKAV
DALIGIGAPA VDALIPLLGE EGDGQAGATA ALTGIGDPAL EPLAGALDGE NSSIRMGAAR
VLEKLEWAPE GGAEEEIVYL IALQRWAEIV ELGAPAVDLL TARLGDLDEA VQAGAMEALV
GIGAPAVPSL IRLLGRKALR EPAEETLVRI GEPAVEPLIE ALDKTRLRKT AAGVLVRIGR
PAAGALVPVL GHPEIGQTAA GIFEAMGEAS FDALVEALGN DDALIRQRAG DVLAGLGEAA
APPLIGALGH PDDTLRLGAI DALTRFGDPV VDLLTQALND ERYLVRLGAA EVLGRAGWEP
QTESETVWYL IAKEQWASVA GIGPGAVEPL IRTLNDPDSA VQVGAARALG MIGGPAVARL
IYELRTEQDG TQRKAVEALK MIGEPAVIPL IDALQDRDWQ IRLGAARALV GIGDPAVEPL
VRALRAAPPA IRMGAAATLG KIGNPAAIEP LTDALLQDDW RLGRVVVRAL GMMGEPAVRP
LLRVLRDGND ASRKSAVAAL VLIGEPACRL LPGALTDEHF RVRAGVADAL DRLEWSPATG
EEAVVYLIAK ERWGDLARAG PIAVEPLFAV LDDRDDSIRR RAAKVLGEIG DPRAVPGLMN
LLHDDYYSVR REAAAAIVAI GAPAMEPVVA ALDDPDGDVR KRVADVLAEI GDARAIASLE
GIFDDEDWYA RKAAENAVER IRARTENETG DL
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