Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1528 |
Symbol | |
ID | 4846773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1529549 |
End bp | 1531528 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640116221 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001047439 |
Protein GI | 126179474 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACAT CCCCAGGTAC CACGGAGAAG CGAACCAGTC TCACCGGCCG CGACGAGAAG CAGGACAACG CCGGCGAAGT CGAACAACTC ATCCGCGAGC GGACTGCAGA GCTCAGGGAA GAGAATGACG CGCTTCGGCG TGAAAACGCA GAACTCCGCC AGATCGAGAT GATCTACGCC TCGGCGCCGG TTGGTCTGTG TCTGCTCGGC ACGGATACCC GGTACCTGCA TGTCAATCAA CGGTTCGCGG AGATGGACGG GTTCTCCGTC GAGGAGCACA TCGGCAAGAG AGTCCGCGAG CTGGTGCCGG ACCTTGCGGA TGCGGCTGAA GAGCTCGCCC GGGCGGTTGT CGCGACGGGG AAACCCGCGC TTGATATTGA GGTACGGGGG GAAACACCGG CACAACCCGG GGAGCAGAGG CACTGGAACG AGTCCTGGCG GCCGGTAACC GATAATCAGG GACGCGTCAT CGCGATCAGT ATCGCCGCCG AGGACATCAC CGAGCGGAAG CGGGCCGAGG AAGCCCTCCG GGAAAGTGAG GAACGGTTCA CAGCGTTCAT GGACAACAGC CCCGCAGTTG CATTCATGAA GGACGAACAG GGGCGCTACA TATACTTGAA CAAATTCGAC GAGAGTCATT TTAATCGTCG ACAGGGAGAC TTGCGCGGTA AGACGGACTT TGAGTTATGG CCTTTGTATG TCGCCGAACA ACTCTGGAAG AACGACCAAA CCGTCCTCAA GGCAGACAGT GCTATTGAAG TCGTGGAAGA GATGCCCAAC CCGAAAGGAG GCATTACCTA CTGGTGGGCT TGCAAGTTTC CCTTCAAGGA CGCGTCCGCG AAGAGGTATG TTGGAGGTAT CGGAATCGAT ATCACCGACT GGAAACAGGC TGAAGCGGCC TTGCAGGAGA GCGAGGAGAA GTACCGGAAC CTCGTGGAAC TTGCGCCGGA ACCGATCGCG GTCCACTGCC GGGGTAACGT CGTCTACGCC AATCCTCCCT GTGTCACTCT TTTCGGGGCA GAAAGGCGGG AGGATCTCGT CGGCAAACCG GTCCTCCAGT TTGTCCACCC GGACGACCAC GAAGTATTCA GGGGACGTTA CCGCGAGATG AGGGAGAAGG GTACGACCGT GCCCCTGCGC GCAGAGAGGT TTGTGAGGCT CGACGGTCAG GTAGTCGATG TTGAGGTTGT TGCTACCCCC ATTCTGTACG AAAACCTGCC TTCGGTGATG GTCCTCTTCC GGGACATCAC CGAGCGGAAG CGGGCCGAGG AAGCGTTTCA GCGATACGCC GAGAATCTGG GCCTGCTCCA CGGCGATCTG GAGGTCGCGA ACCGGGAGGC GAACCTCTAC CTGGACATCC TTACCCACGA TATCGGCAAC ACCGAGAACG TCTCGAACCT TTATGCCGAC CTGCTCATCG AGTCCCTTGA CGGAGAGGCA GCCGGATACG CGAAAAAACT GCAGCGCAGC GTCCAGAAGA GCATAGAGAT CCTGGGCATC GTCTCTACCA TCCGCCGGAT CCATCGGACA AAAACCGAGC TCAAACCAAC GGACCTTGAT GCCGCAGTCC GGGGGGTGAT GAGCGACTAT CCCACCAGTA TCTTCCTCTA TAACGGGACA ACCTACCAGG TTCAGGCGGA CGACCTTCTC CCTGTGGTCT TTGACAACCT TATCAGCAAT GCCGTCAAGT TCGGCGGTCC TGACGTCGAG ATCGCCATCC GGATCGAAGA GAATGATGGG TTCGTCCGGG TGTCAGTCGA AGATACCGGC CCTGGTATCC CGAACGATGA TAAAAATGGG ATTTTCCACT GCTACGAAAT GAAGAAACGC GGCGTCGGCA AGGGACTTGG ACTCTATCTG GTGAAGATCC TGGTCGAGCG ATACGGCGGG ACGATCTGGG CCGAGGACCG GGTGACGGGC CGCCCGGATG AAGGCGCGGC GTTCAAGCTC ACACTGAAAC CTGCCTCGCA AACCCGTTGA
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Protein sequence | MSTSPGTTEK RTSLTGRDEK QDNAGEVEQL IRERTAELRE ENDALRRENA ELRQIEMIYA SAPVGLCLLG TDTRYLHVNQ RFAEMDGFSV EEHIGKRVRE LVPDLADAAE ELARAVVATG KPALDIEVRG ETPAQPGEQR HWNESWRPVT DNQGRVIAIS IAAEDITERK RAEEALRESE ERFTAFMDNS PAVAFMKDEQ GRYIYLNKFD ESHFNRRQGD LRGKTDFELW PLYVAEQLWK NDQTVLKADS AIEVVEEMPN PKGGITYWWA CKFPFKDASA KRYVGGIGID ITDWKQAEAA LQESEEKYRN LVELAPEPIA VHCRGNVVYA NPPCVTLFGA ERREDLVGKP VLQFVHPDDH EVFRGRYREM REKGTTVPLR AERFVRLDGQ VVDVEVVATP ILYENLPSVM VLFRDITERK RAEEAFQRYA ENLGLLHGDL EVANREANLY LDILTHDIGN TENVSNLYAD LLIESLDGEA AGYAKKLQRS VQKSIEILGI VSTIRRIHRT KTELKPTDLD AAVRGVMSDY PTSIFLYNGT TYQVQADDLL PVVFDNLISN AVKFGGPDVE IAIRIEENDG FVRVSVEDTG PGIPNDDKNG IFHCYEMKKR GVGKGLGLYL VKILVERYGG TIWAEDRVTG RPDEGAAFKL TLKPASQTR
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