Gene Memar_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1516 
Symbol 
ID4846415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1520344 
End bp1521642 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content65% 
IMG OID640116208 
ProductPEGA domain-containing protein 
Protein accessionYP_001047427 
Protein GI126179462 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGAT CCCTTATCAT TGGAATAACG CTCCTCGTTC TCTGCGCCGG CATCACCGCC 
GTATCTGCAC TGGGAGGAGA TGAAGGATGG TACCGCGTTC ACTGCAACGT GGACGGTGCC
GACGTCTACT TTGACGGACA GTACAAAGGA ACCACCTACG GAGGGGCGCT CGACGTCCCG
GTCTACACCA CCGGGTCGCC CTACAACACC TTCCGGGTAG AGAAGAGCGG CTATCAGTCC
TACACCGGCA GCCTGCCCTC GGACCCTGCA GCCGGCGAGA CCGTGGACGT CTACGCGACG
CTGCAGCCGG TCGAGACTGC CGGTTCGATC CATGTCACCT CGAGCCCCTC GGGTTCGGCC
GTTTACTTAA ACGGGAACTA CCGGGGTACT GCACCGCTCA CGATCCAGAA CCTCGTCCCC
GGCACCTACT CGCTTGAGGC CGATCACACG GGCTACCAGT CCGATTACGC CACCGTCACG
GTCAGGGCAG GGCAGCAGTC GAACGTCCAG TTCACCCTGA CCCCGATCGA GCAGTACGGC
TCGATCAAGG TCACCTCCAG CCCCTCCGGC GCGTACGTCT ACATGGACGG AACCTACAAG
GGCCGGACGC CCCTGACGCT CACGAGCGTC TCGGCAAAGA AACATAACAT CGAACTCGAT
CTCTCCGACT ACTACGACTG GAAGTCGAGC GTGACCGTGA GCCCCGGCGT GACCAGTTAC
GTCAACGCCC ACCTGACGTC CGTCCCCTCC GAGACCACCG GCGCCATCGA CGTGGTCTCC
TACCCGGCAG GTGCGGACGT CTTCCTCGAC GACAAGTACC AGGGCAAGAC TCCCGCGGCA
GGAGTGTATG CGATCTCGAA CGTCCCGGTC GGCTCCCACA CGGTGAGAGT TGCCCTCTCC
GGCTACCTGG ACTACACGAC GTCGGTCATC GTCAGCGGGG CGACCACGAG CCATGTCACC
GCGACGCTCC AGCCCGGCCA GCAGCCGACC TCGACGGGCT CGATCTCGGT CACCTCCTCC
CCGTCGGGGG CCGAGGTCTA CATCGACAAT GCCTATAAGG GCATCACCCC GCTGACCGTC
GACGGCGTTG CCACCGGCAC CCACGCGGTC AGGGTGGCGC TTGCAGGCTA TGGCGACTGG
TCGACCACCG TTCAGGTCGG TGCCGGAAGC ACCGCCTCGG CCTCGGCCTC GCTCTCGCCC
GTGCCGACCC AGGCTCCCCA CGCGGGCGTG GCGCCCTTTG CCGCGATAGG CGCGCTCGGC
GTCCTCGGGC TCCTCGTCGC GCTGCGCAGG CGGGACTGA
 
Protein sequence
MMRSLIIGIT LLVLCAGITA VSALGGDEGW YRVHCNVDGA DVYFDGQYKG TTYGGALDVP 
VYTTGSPYNT FRVEKSGYQS YTGSLPSDPA AGETVDVYAT LQPVETAGSI HVTSSPSGSA
VYLNGNYRGT APLTIQNLVP GTYSLEADHT GYQSDYATVT VRAGQQSNVQ FTLTPIEQYG
SIKVTSSPSG AYVYMDGTYK GRTPLTLTSV SAKKHNIELD LSDYYDWKSS VTVSPGVTSY
VNAHLTSVPS ETTGAIDVVS YPAGADVFLD DKYQGKTPAA GVYAISNVPV GSHTVRVALS
GYLDYTTSVI VSGATTSHVT ATLQPGQQPT STGSISVTSS PSGAEVYIDN AYKGITPLTV
DGVATGTHAV RVALAGYGDW STTVQVGAGS TASASASLSP VPTQAPHAGV APFAAIGALG
VLGLLVALRR RD