Gene Memar_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1506 
Symbol 
ID4847210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1507716 
End bp1508822 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content65% 
IMG OID640116198 
Productaminotransferase, class I and II 
Protein accessionYP_001047417 
Protein GI126179452 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC ACAGGTATGC CGACCGGGTC AAAGGGGTGG AGATGTCGGG TATCCGCAAG 
CTCTTCGAAG CCGGAGGGCC GGACGCGATC AACCTCGGCA TCGGGCAGCC GGACTTCGAT
ACCCCCGACC ACATCAAGAT GGCCGCGATC GCCGCCATCA GGGAGGGAAG AACGGGGTAC
ACCCCGAACA CCGGAATAGT GGAACTCCGG GAGGCTATCT GCGATAAACT CGCGCGCGAG
AACAGCCTCA CCTGCCGGCC CGACCAGATC CTGGTCACGG CGGGGGGAAG CGAGGCGCTC
CATCTCGTGA TGGAGGCGCT CGTCGACCCG GGTGACCGCG TCCTCTTCAC CGACCCGGGT
TTCGTCTCCT ACGCCGCCCT TGCAACCATT GCCGGCGGAA AGCCCGAGGG CGTCGGGCTC
GACGCGTCCC TGCACATCGA CGTCGAGCGG GCGAAGGAGC AGGTGGATGG TGCACGGCTC
TTCGTCCTGA ACTCTCCCGC GAACCCGACG GGCGCCGTCG AGAGCGAGGA GTCGATCCGC
GCCCTCGTGG AGTACGCGAA CGATCGTAAC GTCACCGTCG TCTCCGACGA GGTCTACGAG
CACTTCATCT ACGAGAAAGA GCACGTCAGC GCGGCCCGGT TCGGCGACGA CGTCATCACC
GTCAATGCCG CGAGCAAGAC CTACGCCATG ACCGGGTGGC GGGTCGGCTA CCTTGCGGCA
CCCGGGGACT ACATCCCGGA GTTCCTCAAG GTGCACCAGT ACGCCCAGGC GTGCGCGACC
TCGATATCGC AGTATGCCGC GCTCGCCGCG TACACCGGTG ACCAGGACCC GGTCGTGCGG
ATGCGTAACG AGTACCGCGC CCGGCGCGAC CTCCTCTACG ACGGGCTGAC CGGTCTCGGG
TTCGATTTCC CCCGGCCGGA AGGTGCGTTC TACATGTTCG TCCCGATGGG GCGAAACCTT
ATCGAGAAGG CCATCGATGC GGGCGTCATC ATCGTGCCGG GTTTGGCGTT CGGCACGAGG
GCACCCGAAT ATGCACGCTT CAGCTACGCG ACCTCCCGGG AGAACCTCTC CCGTGCGGTC
GGGCGGCTCG GGGAACTGAT GGGGTGA
 
Protein sequence
MNKHRYADRV KGVEMSGIRK LFEAGGPDAI NLGIGQPDFD TPDHIKMAAI AAIREGRTGY 
TPNTGIVELR EAICDKLARE NSLTCRPDQI LVTAGGSEAL HLVMEALVDP GDRVLFTDPG
FVSYAALATI AGGKPEGVGL DASLHIDVER AKEQVDGARL FVLNSPANPT GAVESEESIR
ALVEYANDRN VTVVSDEVYE HFIYEKEHVS AARFGDDVIT VNAASKTYAM TGWRVGYLAA
PGDYIPEFLK VHQYAQACAT SISQYAALAA YTGDQDPVVR MRNEYRARRD LLYDGLTGLG
FDFPRPEGAF YMFVPMGRNL IEKAIDAGVI IVPGLAFGTR APEYARFSYA TSRENLSRAV
GRLGELMG