Gene Memar_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1495 
Symbol 
ID4847851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1493995 
End bp1495173 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content60% 
IMG OID640116187 
ProductAAA family ATPase 
Protein accessionYP_001047406 
Protein GI126179441 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000702587 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGGC GGGATGCGGA GGCACAGATC CGATCGCTCG CTCTCGGCTT TCCGGCAGTA 
GCCGTCATCG GCCCCCGCCA GTCGGGAAAG ACGACGCTCG TCCGGTCGGT ATTCCCGCAG
CTGCCCTACA TCTTGCTCGA GGATCCCGAC ACCCGCGCCT TCGCAGAGGA GGATCCCCGC
AGCTTTCTCG CACAGTACGA AAAGACCGGG GCGGTCCTCG ACGAGGTCCA GAGAGTCCCG
GAGCTCTTCT CATACCTCCA GGGAGTCCTT GATACGAACC GGAGGCCGGG ACGGTTCATC
CTCACCGGAT CCCAGAACTT CCTGATGATG GAACGGATAT CCCAGTCGCT TGCCGGCCGG
GTCGGGATCG TCAAACTCCT CCCCCTCTCG ATGGGAGAAC TTGTCCATGC CGGGATAGGG
ATTGAACGCT ACGAGGATCT CCTCTATGCC GGCCTCTTCC CCCGCCCCTA CAGCAGCAGC
ATTCACCCGC GAGACTTCTA TTCATCGTAT ATCCAGACCT ACATCGAGCG CGATCTCCGC
CTTCTCAAGC AGGTGCAGAA CCTCTCGGCG TTCCAGACGT TCATGAAGAT GTGCGCCTAC
CGGTCCGGCC AGGTGGTGAA CTACTCGTCC CTCGCCCATG ACTGCGGCAT CACCTACAAC
ACGGCAAAAG AGTGGCTCTC CCTCCTGGAG ACGTCGATGC TGGTCGTCCA GGTCAGGCCG
CATCACAAAA ACTTCAACAA ACGGCTTGTG AAGATGCCGA AGCTCTACTT CACAGACCCC
GGCCTTGCCG CACACCTGGC CGGGATACAG GGTGCCGACG ACCTCGGTTA CCACCCCCTC
AAAGGAGGGC TCTTTGAATC GCTCATCATA ACGGAGTTCC TGAAGTTCCG GCTTAACCGG
GGCAAAGAGC CCAACCTCTA CTTCTGGCGG GACAAACTCG GGCATGAGAT CGACTGCATC
ATCGAGTATC AGGGGTGGGA TCCCGTCCCG GTCGAGATCA AGTCGGGCAG AACGGCAAGT
GCCGACTTCT TTGACGAGAT CACGTACTGG AACGGGCTCT CCGGCAACGC CCCGGATCGC
TCGTTCGTGG TCTACGGGGG CGACCAGTCC CAGCGCCGGG CGGCAGGGCA ACTGATCGGG
TACCGAGATC TAGAGCCGAT CCTGCAGTAT CTGGAGTGA
 
Protein sequence
MIRRDAEAQI RSLALGFPAV AVIGPRQSGK TTLVRSVFPQ LPYILLEDPD TRAFAEEDPR 
SFLAQYEKTG AVLDEVQRVP ELFSYLQGVL DTNRRPGRFI LTGSQNFLMM ERISQSLAGR
VGIVKLLPLS MGELVHAGIG IERYEDLLYA GLFPRPYSSS IHPRDFYSSY IQTYIERDLR
LLKQVQNLSA FQTFMKMCAY RSGQVVNYSS LAHDCGITYN TAKEWLSLLE TSMLVVQVRP
HHKNFNKRLV KMPKLYFTDP GLAAHLAGIQ GADDLGYHPL KGGLFESLII TEFLKFRLNR
GKEPNLYFWR DKLGHEIDCI IEYQGWDPVP VEIKSGRTAS ADFFDEITYW NGLSGNAPDR
SFVVYGGDQS QRRAAGQLIG YRDLEPILQY LE