| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1489 |
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| Symbol | |
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| ID | 4846722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1488803 |
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| End bp | 1489747 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640116181 |
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| Product | SMF family protein |
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| Protein accession | YP_001047400 |
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| Protein GI | 126179435 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000274603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACC TTTCTATCAG GGAGATTGCC TTTCTTGCCG CCCTCAACGA CAATCAGGCC
CTGAAGCGGC AGGGGTACGC CGAATACTTC CGTGACCCGG CGGTTCTCCG CGACCTCTAC
GCTGATACCT TCGAGCCGGG TGCGAAGCCC CGTCGGGCCT ATCCCGGCCC GCTCATCGCA
CGGGCGGAGG AGATCCGGGA GAAAGGTCTT CTTGCGTTCT ATATCGATAC GCTTACGGGC
TACAGGCAGA AAGGCGTCCG GATTCTGCCG GTCTTTGATG CCGGATACCC GGGGAGGCTT
CTGGGGATTC GGGATCCCCC TTTTCTCCTC TACCAGGTGG GCCGCGAGGA GACCCTCGCA
AAGCCGGCGG TTGCCGTCGT CGGCACGAGA ACGATCTCCC GGGCGGGTAT CGAGAGAGCC
CGGGAGACGG TGGATCTTCT GGTTCGCCTC GGTTACGTGG TCGTGAGCGG GCTTGCTCTC
GGGACGGATG CCTGCGCTCA TACGGCCGCG ATCGACTGCG GAGGCGAGAC GGTGGCGGTC
CTGCCGGGCG ACGTCACGGT TGTTGTTCCG GGGGAAAACC GGACTCTTGC CGCGAGCATC
GCCGGTTCGG GTTCGCTGCT CGGTGAAATC ACACACCTTG CGGGGATGCA CAAAGGCAGG
TTCCTTGAGA GGAACCGCAT CACGAGCGGC CTCTCCGACG GTGTGGTCGT CATCGAGACC
GGCAAATCCG GGGGTTCCGT CCGGCAGGCG GAGACGGCGT TCCGGCAGGG ACGACCGGTC
TACGTCCTGG AGCCTGACTG TTCGGACGCA AAGGCCGTAG CCGGGTATCA GCACCTTGTC
TCGTGCGGGG CGATCCCGGT CGAATCCCCC GGCGGCCTCT CCCCGCACTT TGCGAGGATG
CAGCACCCGC CCTCACGAGT GACGACGCTC GCGGATTTCT GGTGA
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| Protein sequence | MDNLSIREIA FLAALNDNQA LKRQGYAEYF RDPAVLRDLY ADTFEPGAKP RRAYPGPLIA
RAEEIREKGL LAFYIDTLTG YRQKGVRILP VFDAGYPGRL LGIRDPPFLL YQVGREETLA
KPAVAVVGTR TISRAGIERA RETVDLLVRL GYVVVSGLAL GTDACAHTAA IDCGGETVAV
LPGDVTVVVP GENRTLAASI AGSGSLLGEI THLAGMHKGR FLERNRITSG LSDGVVVIET
GKSGGSVRQA ETAFRQGRPV YVLEPDCSDA KAVAGYQHLV SCGAIPVESP GGLSPHFARM
QHPPSRVTTL ADFW
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