Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1489 |
Symbol | |
ID | 4846722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1488803 |
End bp | 1489747 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640116181 |
Product | SMF family protein |
Protein accession | YP_001047400 |
Protein GI | 126179435 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000274603 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAACC TTTCTATCAG GGAGATTGCC TTTCTTGCCG CCCTCAACGA CAATCAGGCC CTGAAGCGGC AGGGGTACGC CGAATACTTC CGTGACCCGG CGGTTCTCCG CGACCTCTAC GCTGATACCT TCGAGCCGGG TGCGAAGCCC CGTCGGGCCT ATCCCGGCCC GCTCATCGCA CGGGCGGAGG AGATCCGGGA GAAAGGTCTT CTTGCGTTCT ATATCGATAC GCTTACGGGC TACAGGCAGA AAGGCGTCCG GATTCTGCCG GTCTTTGATG CCGGATACCC GGGGAGGCTT CTGGGGATTC GGGATCCCCC TTTTCTCCTC TACCAGGTGG GCCGCGAGGA GACCCTCGCA AAGCCGGCGG TTGCCGTCGT CGGCACGAGA ACGATCTCCC GGGCGGGTAT CGAGAGAGCC CGGGAGACGG TGGATCTTCT GGTTCGCCTC GGTTACGTGG TCGTGAGCGG GCTTGCTCTC GGGACGGATG CCTGCGCTCA TACGGCCGCG ATCGACTGCG GAGGCGAGAC GGTGGCGGTC CTGCCGGGCG ACGTCACGGT TGTTGTTCCG GGGGAAAACC GGACTCTTGC CGCGAGCATC GCCGGTTCGG GTTCGCTGCT CGGTGAAATC ACACACCTTG CGGGGATGCA CAAAGGCAGG TTCCTTGAGA GGAACCGCAT CACGAGCGGC CTCTCCGACG GTGTGGTCGT CATCGAGACC GGCAAATCCG GGGGTTCCGT CCGGCAGGCG GAGACGGCGT TCCGGCAGGG ACGACCGGTC TACGTCCTGG AGCCTGACTG TTCGGACGCA AAGGCCGTAG CCGGGTATCA GCACCTTGTC TCGTGCGGGG CGATCCCGGT CGAATCCCCC GGCGGCCTCT CCCCGCACTT TGCGAGGATG CAGCACCCGC CCTCACGAGT GACGACGCTC GCGGATTTCT GGTGA
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Protein sequence | MDNLSIREIA FLAALNDNQA LKRQGYAEYF RDPAVLRDLY ADTFEPGAKP RRAYPGPLIA RAEEIREKGL LAFYIDTLTG YRQKGVRILP VFDAGYPGRL LGIRDPPFLL YQVGREETLA KPAVAVVGTR TISRAGIERA RETVDLLVRL GYVVVSGLAL GTDACAHTAA IDCGGETVAV LPGDVTVVVP GENRTLAASI AGSGSLLGEI THLAGMHKGR FLERNRITSG LSDGVVVIET GKSGGSVRQA ETAFRQGRPV YVLEPDCSDA KAVAGYQHLV SCGAIPVESP GGLSPHFARM QHPPSRVTTL ADFW
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