| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1464 |
|---|
| Symbol | |
|---|
| ID | 4846582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1452855 |
|---|
| End bp | 1453466 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640116155 |
|---|
| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
|---|
| Protein accession | YP_001047375 |
|---|
| Protein GI | 126179410 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0293] 23S rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCTC AATGGACTAA AGACAGCGTC TATCGAAAGG CGATGAAGGC GGGATACCGG
GCACGTGCCG CCTACAAGCT GCTGGAGATC CAGCAGCGAA ACGGTATCAT CAGGCCCGAC
GACAACGTCG TCGACCTCGG GGCGGCGCCG GGCAGCTGGC TGCAGGTGCT TCGCGACCTG
ACCGACGGCA GGGTCATCGG CGTGGATCTC AATCCCATCG CGCCCATGGA AGGCGTCACC
ACCATCGTCG GGGACTTCAC CGATCCTCTC GTCCAGGAGC GCATCCGCGA GGAGGCCGGC
GGCGTCGTCA GCGTCGTGGT CTCCGACGCC TCGCCGAAAC TCTCCGGCCA GAAGAGTTAC
GATCAGGCCC GTGCGATCGG GCTCGGCGAG GACGCACTGG CGTTTGCCTG CACGGTCTTA
AAACCCGGCG GCAATATGGT GATAAAGTCG TTCCAGGGCG AGCTCTTCGG GGAGCTGATT
GCCGAAACGA GAAAGCATTT CTATTCCGTC CGGGGGTACA GGACGAAGGC GTCGCGGAAA
GGGAGTGCCG AGACCTACAT TATTGCAAAG AATTTCAAGG GAACATGCGA TGATGCTGAA
GGACCCCTAT AA
|
|---|
| Protein sequence | MGSQWTKDSV YRKAMKAGYR ARAAYKLLEI QQRNGIIRPD DNVVDLGAAP GSWLQVLRDL
TDGRVIGVDL NPIAPMEGVT TIVGDFTDPL VQERIREEAG GVVSVVVSDA SPKLSGQKSY
DQARAIGLGE DALAFACTVL KPGGNMVIKS FQGELFGELI AETRKHFYSV RGYRTKASRK
GSAETYIIAK NFKGTCDDAE GPL
|
|---|
| |