Gene Memar_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1458 
Symbol 
ID4846546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1448845 
End bp1449720 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content63% 
IMG OID640116149 
Productdihydrodipicolinate synthase 
Protein accessionYP_001047369 
Protein GI126179404 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.370783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGG GAATCCTTCC GGCAATCATT ACCCCTTTTT ACCGGGACTC CAGAGCGAGT 
CTCGATATTG AAGGATTACA GTCCAACATA GAATCACTCC TGCAGCGCGG GGTTCACGGT
ATCGTGCCCT GCGGGTCGAC CGGCGAGTCC GCGACGCTCA CGTTCGAGGA GCACGAGCAG
GTGATCGGCA AGGCCGTCGA GGTCGTCGAC GGGCGGGTCC CGGTGCTTGC CGGGACGGGA
TCGAACAACA CCGAAGAGGC CGTCCGCCTG ACCCGGTCGG CGAAGGATGC GGGTGCGGAC
GGCGCGCTCA TCATCAGCCC CTACTACAAC AAGCCGAACC GCTCCGGGCT CATCAAGCAC
TTCACGAAGC TTGCCGACCT TGATATTCCA ATCGTCCTCT ACAACGTCCC CGGCCGGACG
GGGCAGAACC TCCAGCCCGA CCTGGTGGCG GAGCTCGCGA GACACCCGAA CATCGTCGGG
ATCAAGGAGG CAAGCGGCGA CATCACCCAG ATCTCCCGTA TCATCGAGGA GACGCGGGAC
GAGGAGTTCA GCGTGATCTC CGGGGACGAC GCGATGACGC TCCCCGTCCT CGCCGTAGGG
GGTGCGGGCG TGATATCGGT GGCGGCAAAC GTCGACCCCG GCCGGATGGT GGGGATGTAC
GAGGCCTTCC GGGCCGGCGA CCTTGCCCGC GCACAGGTTC TGCACTACGA ACTCGCTCCC
CTCATGCGGG CGATGTTCAT CGACACGAAC CCCATCCCCG TGAAGAAGGC GGTGGAACTC
CTCGGGATGG CCGCGGGCCC GGTCAGGCTG CCGCTCGACG AACTCGACGA AGCAAAGACG
GAACAACTGA GAAAGGTGCT GGTGAATCAT GGTTAA
 
Protein sequence
MFEGILPAII TPFYRDSRAS LDIEGLQSNI ESLLQRGVHG IVPCGSTGES ATLTFEEHEQ 
VIGKAVEVVD GRVPVLAGTG SNNTEEAVRL TRSAKDAGAD GALIISPYYN KPNRSGLIKH
FTKLADLDIP IVLYNVPGRT GQNLQPDLVA ELARHPNIVG IKEASGDITQ ISRIIEETRD
EEFSVISGDD AMTLPVLAVG GAGVISVAAN VDPGRMVGMY EAFRAGDLAR AQVLHYELAP
LMRAMFIDTN PIPVKKAVEL LGMAAGPVRL PLDELDEAKT EQLRKVLVNH G