| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1439 |
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| Symbol | |
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| ID | 4846947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1430831 |
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| End bp | 1432648 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640116129 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001047350 |
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| Protein GI | 126179385 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00245617 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCAA AACACACTGC TCTGGAGAAA TATTTCGGTT ACACGTCGTT CCTCCCCCAC
CAGGAAGAGA TCGTCGACGC CGTCCTCGCC GGGCGCGACG TCCTCGCCGT CATGGCGACC
GGAGGCGGCA AATCCCTCTG CTACCAGCTC CCCGCCCTCG TCTTCGGCGG GCTTACGGTC
GTCGTCTCGC CGCTCATCGC CCTGATGAAG GATCAGGTCG ACGGTCTCCG GGCAAACGGC
ATCCCGGCGG CGACGATCAA CAGCTCGCTC GGGTATGGGG AGCAGAAGAT CGTCGAGCGG
GTGATCCTCG AAGGCCGCAT CCGGATCCTC TACGTCTCGC CGGAACGGGC AGTGCAGCCG
TTCTTCCTCT CGCTCATCGC AAAAGCGGAC GTCCGGCTCA TCGCCATCGA TGAGGCGCAC
TGCATCTCCA TGTGGGGCCA CAACTTCCGC CCCGAATACC GCCGGCTTCG GGTGCTCAAA
GAGCGGTTCC CCACCGTCCC CGTCATCGCC CTGACCGCGA CCGCCATCCC CGCCGTCCAG
AACGACATCG CGGTCGAGCT CGCTCTCTCG AACCCTGCCC GGTTCGTCGG GAGTTTCAAC
CGCAAAAACC TCACCTACCG GGTGGTGCCG AAGGCACGCT ACTTCCCGAG GCTGGTCGCC
TACCTGAATG AACACAAAAA CGACGCCGGC ATCATCTACT GCTTCTCCCA GAAAGCAACG
GTGGAACTCG CGAAGAAACT GCAGGATAAA GGGTTCTCGG CGCTCCCCTA CCACGCCGGC
CTCCCCGACG CCGTCCGCGC GGAGCACCAG GAGGCCTTCT CCCGCGGCGA CGTTGCGATC
ATCTGCGCCA CCGTCGCCTT CGGCATGGGC ATCGACAAAC CGGACGTCCG GTTCGTCATC
CACACCGACC TCCCGAAGGA TATCGAGTCC TACTACCAGG AGACCGGCAG AGCAGGGAGG
GACGGGGAGC CGGGCGACTG CATCCTCTAC TACTCCCGTG GCGACTACGG CACGATCCGC
TACATCATCG AGAAGGAGGG CGCCGATGCG ACACAGAAGG ACGTCGCCTA CCGTAAAGTG
GGGGCGATGC TCGACTACTG CGAGACTCCC GGATGCCGGA GGAAGTTCCT GCTCGCCTAC
TTCGGCGAGT CCTACCCGGA GGAGCGGTGC GGCGCATGCG ACCGCTGCGA GACGCCGGTG
AAGGTATTCG ACGGGACGGA GGTGGCGGCG GCGGTCATCG CGTGCATCCG CGAGACAGGG
GAACGGTTCG GCGCTTCCTA CATCGCCGAC GTCCTCGCCG GCTCGAAGAG CGCGAGGGTT
CGCGAGAACG GGCACGACCG GCTTTCTGCC TACGGCTCCG GCAGGGGCTA CACCCGCGAC
CAGTGGCTGC TCTTCATCCA GGAGATGGTC GGGAAGGGGT TCGTCGCGTC GACCGGCGGC
CGGTACCCCG TCCTCGTTTC AAACGACCGG AGCCGGGCGG TGCTCGCGGG GAAGAACCCG
GTGCCGCTCG CAGAGCCGCG TCCGGAGGGC GTCGTCGCGC CGGAAACCGG GGAGAAGGAC
TACGACGAAC CCCTCTTCCT CCGGCTCCGC CGGCTCCGGA AAGTCGTTGC CGACCTCGAT
CACGTGCCGC CGTTCGTCGT CTTCCACGAC CGGAGCCTCA AGGAGATGGC AACGTACTAC
CCGACCACCG GCGTTGCCCT CCTCGAGATC TACGGCGTCA GCGAGGCGAA ACTGAAGCGT
TACGGCAGGA AGTTCCTCGA CGCCATCGAT AAGCACTGCG CCGAACACGG GATCGGGCCG
GAGCAGCGGA GAGGGTGA
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| Protein sequence | MDAKHTALEK YFGYTSFLPH QEEIVDAVLA GRDVLAVMAT GGGKSLCYQL PALVFGGLTV
VVSPLIALMK DQVDGLRANG IPAATINSSL GYGEQKIVER VILEGRIRIL YVSPERAVQP
FFLSLIAKAD VRLIAIDEAH CISMWGHNFR PEYRRLRVLK ERFPTVPVIA LTATAIPAVQ
NDIAVELALS NPARFVGSFN RKNLTYRVVP KARYFPRLVA YLNEHKNDAG IIYCFSQKAT
VELAKKLQDK GFSALPYHAG LPDAVRAEHQ EAFSRGDVAI ICATVAFGMG IDKPDVRFVI
HTDLPKDIES YYQETGRAGR DGEPGDCILY YSRGDYGTIR YIIEKEGADA TQKDVAYRKV
GAMLDYCETP GCRRKFLLAY FGESYPEERC GACDRCETPV KVFDGTEVAA AVIACIRETG
ERFGASYIAD VLAGSKSARV RENGHDRLSA YGSGRGYTRD QWLLFIQEMV GKGFVASTGG
RYPVLVSNDR SRAVLAGKNP VPLAEPRPEG VVAPETGEKD YDEPLFLRLR RLRKVVADLD
HVPPFVVFHD RSLKEMATYY PTTGVALLEI YGVSEAKLKR YGRKFLDAID KHCAEHGIGP
EQRRG
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