Gene Memar_1436 details

Gene Information

• Locus tag: Memar_1436
• ID: 4847590
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1428539
• End bp: 1429219
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640116126
• Product: HhH-GPD family protein
• Protein accession: YP_001047347
• Protein GI: 126179382
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2231] Uncharacterized protein related to Endonuclease III

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00274165
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCGA CCCTCACCGA GGATCTCATT CAGATCTACG ACGCCCTCTT CGCGGCGTTC 
GGCCACCAGC ACTGGTGGCC CGCAAAGACG CCGTTCGAGA CGATGGTCGG CGCGATCCTC 
ACCCAGAACG TCTCCTGGAC GAACGCGGCG CAGGCCATCG CAAACCTCGA AGACGCCGGG 
ATGCTCGACC CCCGCCTCCT CGCCGAGGCC GATACAGCAG ATATCGCCCC CCTGATCGTC 
CCTTCCCGGT ACTACAACCA GAAGGCGGAG CGGATCCGGG AGTTTTCCCG AGTCTATGTC 
AGGGAGTTTC GCGCCGACCC GGCGGCGATG GCGGCCATGG AGACCGGCGA ACTCCGCGAG 
CGGCTGCTCG CCCTCCGCGG TTTCGGGAAG GAGACAACGG ACACCATCCT GCTGTATGTC 
TGCGAAAAGC CGGTCTTCGT CGTCGATGCC TATACCCGGC GGATATTCTC GCGCTACGGC 
TTCCTCCCCG AAGGGGCGTC CTACGACCTG ACGCAACGGC TCTTTGCCGA GAACCTCGAG 
CCGGACGCGG AACTCTTCAA CGACTACCAC GCCCAGATCG TGCGCCTGGG GAATACTATC 
TGCAAAAGAT CGCCGCTCTG CGACCGCTGT CCCATCCGCG AGGTTCGCGG GACGCTCCGG 
TGCGCCGTGG GGCGGGGGTG A 

 

Protein sequence

MAATLTEDLI QIYDALFAAF GHQHWWPAKT PFETMVGAIL TQNVSWTNAA QAIANLEDAG 
MLDPRLLAEA DTADIAPLIV PSRYYNQKAE RIREFSRVYV REFRADPAAM AAMETGELRE 
RLLALRGFGK ETTDTILLYV CEKPVFVVDA YTRRIFSRYG FLPEGASYDL TQRLFAENLE 
PDAELFNDYH AQIVRLGNTI CKRSPLCDRC PIREVRGTLR CAVGRG