| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1435 |
|---|
| Symbol | |
|---|
| ID | 4847296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1426950 |
|---|
| End bp | 1428539 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640116125 |
|---|
| Product | NAD+ synthetase |
|---|
| Protein accession | YP_001047346 |
|---|
| Protein GI | 126179381 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0116683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCT CACTCCTCCA GGTGAACACA GTCGTCGGCG ACCTCGCCGG CAACGCCGGC
CGGATTGCGG CGGGCACACG CGAGGCGGCC CGCCACCGAC CGGACCTGAT CGTCGCCCCG
GAACTCTCCC TGACCGGCTG CCCGCCCCGG GATCTGCTCC TGCAGGCGGG GTTCATAACC
CGGAGCCTCG CCGTCCTGGA TGACCTGGCC GCCGGGCTCG CGGATGCCCC ACCGGTGCTC
GTCGGTTTCG CCGAGCCGAA CCCCGCCGGA ACCGGCCGAC CGCTCTTCAA CGCCGCCGCC
CTCCTCCGGG ACGGGGAGGT GCGGGGGACG TTCCGGAAAA CCGCAATCTC CGGCAGCTTC
GATGAAGGCC GCTACTTCGA GCCGGCGGCC GGGAGCCCCG GGACATTCCA CCTCGGCGAG
AGAACGGTCG GGGTCGCCAT CGGCGAGGAG ATCCGGTGCG GCGGAGAGGT GCCGGACGTG
ATCGTGAACC TCTCTGCGTC GCCGTTCGTC ATCGGAAGAC AGTGCCTGCG CGAGGAGATG
TTCTCCCGGG CCGCGAAGGA GAACCGGGTC GCGATCGTCT CGGCAAACCT CGTCGGCGGG
AACGACGACC TGGTCTTCGA CGGCCGGAGC GTTGCTTTTT CCGCAGACGG AACCCTCATC
GCCCGCGGTG CGGCTTTTGC CGAGGAGATC GTAACCATCG ATCTCGCCCG CCCCGCCCCG
CAGGCGGTCG CTCCCGACGA CCAGGGGCCC GAGTCCGAGA TCTGGCGGGC GCTGGTGCTC
GGCACCCGCG ACTACGTCCA TAAGTGCGGA TTTAGATCCG TCCATCTCGG TCTCTCCGGC
GGGATTGACT CCTCGCTCGT GGCCGCCGTC GCCGCCCGGG CGCTCGGGCA GGAGAACGTC
CTCGGGGTGC TCCTCCCCTC TCCCCACACC TCCGCGGAGA GCATCGAGGA TGCCCGGGAA
CTTGCGGCGA ACCTTGGTAT CCGGGTGCAG TGCATCCCGA TTGCTCCTAT GATGGAGGCG
TTCGACAGCG GCCTCGCGGA CGTCTTCGCG GGGCTTGCCC CCGACATCAC CGAGGAGAAC
CTGCAGGCCA GGATCCGGGC GACGGTTCTG ATGGCACTCG CGAACAAGTT CGGCTCCATG
CTCCTCTCGA CCGGGAACAA GTCGGAGGTC GCGGTCGGCT ACTGCACCCT CTATGGGGAT
GCGGCGGGGG GGCTCTCCGT GATCGCGGAC GTCCCGAAGG GGATGGTCTA CCGGATTGCC
CGGTGGCTGA ACGCCGAACG CCCCGTCATC CCCGAGAGGG TGCTCAAAAA ACCCCCCTCA
GCGGAGCTCC GGCCCGGCCA GACCGACCAG GAGATCCTTC CTCCCTACGA CCTCCTCGAC
GCGATCCTTC ACCGTCTTAT CGACTGTCTC GAGTCGCCCG ACGAGATCAT CGCCGCCGGG
TATCCCGAAG AGACCGTCCG GGAGGTCGCC GGAATGGTCG AGCGGGCTGA GTTCAAGCGC
AGGCAGGCCC CGCCCGGGAT AAAAGTGACC GACAGGGCGT TTTCCACCGA CTGGCACATG
CCGATCGCCG CGAAACCCTG GTGGCGGTGA
|
|---|
| Protein sequence | MKISLLQVNT VVGDLAGNAG RIAAGTREAA RHRPDLIVAP ELSLTGCPPR DLLLQAGFIT
RSLAVLDDLA AGLADAPPVL VGFAEPNPAG TGRPLFNAAA LLRDGEVRGT FRKTAISGSF
DEGRYFEPAA GSPGTFHLGE RTVGVAIGEE IRCGGEVPDV IVNLSASPFV IGRQCLREEM
FSRAAKENRV AIVSANLVGG NDDLVFDGRS VAFSADGTLI ARGAAFAEEI VTIDLARPAP
QAVAPDDQGP ESEIWRALVL GTRDYVHKCG FRSVHLGLSG GIDSSLVAAV AARALGQENV
LGVLLPSPHT SAESIEDARE LAANLGIRVQ CIPIAPMMEA FDSGLADVFA GLAPDITEEN
LQARIRATVL MALANKFGSM LLSTGNKSEV AVGYCTLYGD AAGGLSVIAD VPKGMVYRIA
RWLNAERPVI PERVLKKPPS AELRPGQTDQ EILPPYDLLD AILHRLIDCL ESPDEIIAAG
YPEETVREVA GMVERAEFKR RQAPPGIKVT DRAFSTDWHM PIAAKPWWR
|
|---|
| |