Gene Memar_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1434 
Symbol 
ID4846732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1425364 
End bp1426809 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content65% 
IMG OID640116124 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001047345 
Protein GI126179380 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0656222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTTA TAGAGGACTA TGCAGAGAGC ATGCCGTGGA GCGATCTCAC CCGGCCGGAG 
ATCCGGCGCA TCGGTTGCGT GGCGCACCTG TATCCGGGGG GGGTCAGCCT GACCTCGTAC
AGCCGCCGAT CCGCAATCCG GGATACCCGG CTCCTCCTGG TTGCCGCATC GGTTCTCGTT
GCCTTCATCG CAAACGCCGC CGGCCTCCTT GCCGGCGTCA CCATCGTCCT CCCGCACCTG
CTGTACCTGC CGATCGTCCT TGCCGCCTAC TGGTTCCCCC GCCGCGGAAT CCTCTTCTCG
CTTGCCCTGG CTCTCGGGTA CCTGGCGCTG GCCCTGCCCT TCACCGGGGG AGAGGCCGGA
GCGGTCGTCT CGGCGCTCTC GCGGGCGGTA GTCTTCGCCG CCGTCGGCAC CGTCGTGTCG
TTCCTCTCTC TCCGGCTGCG GGAGCAGGAA GAACGGTACC GGGGGATCTT CGATAACTCG
GAGGCGGGAA CGTTCATCAT TGCCCCCGGC GAGTCCGGGC CGCAGATCGA GGAGACGAAC
TACGTGGGCG CCGCGCTCCT CGGCTTCACG ACGAAGGATC TGGTCGGGAA GCACGTCGCC
GGGTTCTTCG AAGATCCAGA AGCCTGGGAA ACGCTAGCGG CGGATATCGA CCGCAGTGGA
ACCCTCTATG ACTACGAGAC AGTGCTTCTC CGAATCGACG GAACAGCCGT CCAGGTGCTC
GTATCAGCCG GCCGGCTCCC GGGCGAGCGG ATCGTCCTCA CGCTCGTCGA TATCACCGCC
CGGAAGAACG CCGAAGACGC ACTCCGCCGG ACGAACGCCA AACTGAATAT GCTGGGCCAT
CTCACCCGGA GCGATCTCGC CGCGGCAGTA TCGGGACTCC TCGAGCGGAT CGCCGGAGGG
ATGCGGGAGT TCGACGACCC TGGTATCCAC CGGTATCTCC GGAGCCTGGA AGAGGACGCT
CGGGTGGTGC AGCGGCGTGC AGAGATCACC CGGGACTACC AGGATCTCGG CCTCCGGCCG
TCGGGCTGGC AGCCAGTTCA GAAGGTGATC TGGGAGGTGA CGTCGCGTCT GGTGCTTCCC
GGAATATCGG TTCGTTCCTG GGTAGAGCGG CTCGAGGTCT TCGCCGATCC GATGCTCGAC
CGGGTCTTTT CGAACCTGCT GGAGAACGCC GCCCGGCACG GGAAGACTGT ATCGTCGGTC
GTCATCACCT ACCGGATCCT GGACGACGGG CTCGTGATCT CTATCGAGGA TGACGGCGTG
GGAATTCCCG AAGCGGAGAA GGAGCAGATC TTTGACTACG GTGTCGGCAT CGAGGGCGGG
CTCGGGCTCT TCCTCGTCCG GGAGATCCTT GCCATCACGA ACATGACAAT CCGGGAGACC
GGAACGCCCG GCAGGGGGGC GAGGTTCGAG ATACACGTGC CCCCGGCTGG ATACCGGATA
ATCTGA
 
Protein sequence
MRLIEDYAES MPWSDLTRPE IRRIGCVAHL YPGGVSLTSY SRRSAIRDTR LLLVAASVLV 
AFIANAAGLL AGVTIVLPHL LYLPIVLAAY WFPRRGILFS LALALGYLAL ALPFTGGEAG
AVVSALSRAV VFAAVGTVVS FLSLRLREQE ERYRGIFDNS EAGTFIIAPG ESGPQIEETN
YVGAALLGFT TKDLVGKHVA GFFEDPEAWE TLAADIDRSG TLYDYETVLL RIDGTAVQVL
VSAGRLPGER IVLTLVDITA RKNAEDALRR TNAKLNMLGH LTRSDLAAAV SGLLERIAGG
MREFDDPGIH RYLRSLEEDA RVVQRRAEIT RDYQDLGLRP SGWQPVQKVI WEVTSRLVLP
GISVRSWVER LEVFADPMLD RVFSNLLENA ARHGKTVSSV VITYRILDDG LVISIEDDGV
GIPEAEKEQI FDYGVGIEGG LGLFLVREIL AITNMTIRET GTPGRGARFE IHVPPAGYRI
I