Gene Memar_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1421 
Symbol 
ID4847102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1412557 
End bp1413231 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID640116111 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001047332 
Protein GI126179367 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.831543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTGA CCTGGCTTGG CCACGCGTGT TTTTCTCTTG CAGGATCGCG GACGATCGTC 
ATCGATCCTT TCATCCCGGA GGGATCGCTT CCCGCGGAGC CCGATATCGT TGCCGTGACG
CACGCCCACG CCGACCACCT GGGCATTGCC ACAGAACTCT CGAAGAAGAC GGTCGCCGTC
AACGAGGTGG CGAAGTACCT GAAAACGAAG GGCGTTCCCG CCGAACCGAT GAACCTCGGC
GGCACCATCA CCGTCGACGG CGTCCGGTTC ACGATGACGC CCGCGCTCCA CTCGTCGTGG
CTGGAAGACG AGGGACCGGG GTTCTACGGC GGTGTGGCCG CCGGATTCGT CATCACGATG
GACGGTGTCA GCGTCTACCA CGCCGGCGAC ACGGCGCTCT TCTCCGATAT GCAGCTCATC
CGCGACCTCT ACCGGCCGGA CGTGGCGCTT CTCCCCGTAG GCGGGTGCTT TACGATGGGG
CCCGAAGAGG CGATGATCGC GGCGCGATAC ATCGGCGCGC CGCTCGTGGT CCCGATGCAC
TACGATACCT TCCCCGCCAT CCGGCAGAAC CTGGAGGAGT TCAAGCGGAC CATCGAGCGC
ACGACGTCGA TCCGGGTCGC GCTGCTCTCG CCGGGAGAGA GCATCGAGGT CGGCCCGGAA
AAGGCCGGGG AGTGA
 
Protein sequence
MRLTWLGHAC FSLAGSRTIV IDPFIPEGSL PAEPDIVAVT HAHADHLGIA TELSKKTVAV 
NEVAKYLKTK GVPAEPMNLG GTITVDGVRF TMTPALHSSW LEDEGPGFYG GVAAGFVITM
DGVSVYHAGD TALFSDMQLI RDLYRPDVAL LPVGGCFTMG PEEAMIAARY IGAPLVVPMH
YDTFPAIRQN LEEFKRTIER TTSIRVALLS PGESIEVGPE KAGE