Gene Memar_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1412 
Symbol 
ID4847104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1404596 
End bp1405654 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content62% 
IMG OID640116102 
ProductABC-2 type transporter 
Protein accessionYP_001047323 
Protein GI126179358 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGG CGGCCTTGCG TATCATCGCG GGCAAGGAGT TCTCCGACCA TCTCCGGAGC 
AGGCGGTTCC ACCTCCTCTT CGCGATCCTG GCCGTCGTCG CCGCCGTCGG CATGATCACC
GGAGCGGTCC AGTACTCGAA AGACCTCTCC GACTACAACG CGGTCCAGAT GATCGCGGAG
GGGGACGACG ACCCGACGCT CGCCGGCAAC CTTGCCGGGA TGAAACCCTC CGTCCTCTCG
GCATACTCCC AGATGGGAAT GCTGATGGCC GGTATCGGCG TGGTGCTCGG GATCGCGATG
GGGTTCGACC TGGTGACCCG GGAGAAAGAG AGTAAATCCC TCAAAAGCCT GCTCGCCTAC
CCGGTGTTCC GCGACGAGGT GATCAACGGA AAAGCCCTCG GGGGCGTCGG CGCAATCGCG
CTCGCGATGG GGGTCGTCCT GATCGTCTCC GTTGCAATCA TGGCCCTGTT CGGCATCGTC
CCGAACCTCG ACGAACTGGT ACGCATCCTG GTCTTCGGGG TGACGTCGTT CCTCCTCGTC
TTCACGTTCT TTGCCCTCGC CCTCCTGATG TCGACGGTCT CCAAAGACAG CGGGAGCGCC
CTGCTGTACT CCCTGATCGT GATGATCGTT CTCTCGTCGT TCATTCCGAT CTTCGCGTAC
ACCCCGGTAT ACTCGGCCGT CTTCGGCGAC GCCCCCACCC CGCCGGGCAT GTCCACCTAC
TCCTACCAGC AGAGTTCTTC GGCCTATACT GTGACATCGG TCGCGGTTGC ATACAAATCC
GACGATGCCG TAGACCCGGA AGCCCTCGCG GAGTACGAGC GGGCATCGAG AGAGTACATG
AACCAGAAAC GGACAATCAC CGATATCGTC ACGCTCGTCT CGCCGACCGG CAACTACCAG
ACGATTCTCG GCGCCGTATC GCAGCCCGCA GGGGAGAATA CCCCGGGACT CGGAAACCTC
CTCGGCGCCC TCGCCTGCAA CATCATCGCC CTGCTTGCAA TGCCCGCAGC CTTCTTCGGG
CTGGCATGGG TCCGGTTCAT GCGGGAGGAT ATCCGGTGA
 
Protein sequence
MTQAALRIIA GKEFSDHLRS RRFHLLFAIL AVVAAVGMIT GAVQYSKDLS DYNAVQMIAE 
GDDDPTLAGN LAGMKPSVLS AYSQMGMLMA GIGVVLGIAM GFDLVTREKE SKSLKSLLAY
PVFRDEVING KALGGVGAIA LAMGVVLIVS VAIMALFGIV PNLDELVRIL VFGVTSFLLV
FTFFALALLM STVSKDSGSA LLYSLIVMIV LSSFIPIFAY TPVYSAVFGD APTPPGMSTY
SYQQSSSAYT VTSVAVAYKS DDAVDPEALA EYERASREYM NQKRTITDIV TLVSPTGNYQ
TILGAVSQPA GENTPGLGNL LGALACNIIA LLAMPAAFFG LAWVRFMRED IR