| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1408 |
|---|
| Symbol | |
|---|
| ID | 4846971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1400191 |
|---|
| End bp | 1402626 |
|---|
| Gene Length | 2436 bp |
|---|
| Protein Length | 811 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640116098 |
|---|
| Product | DNA gyrase, A subunit |
|---|
| Protein accession | YP_001047319 |
|---|
| Protein GI | 126179354 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGTCTG AAGGGGAAGG GGTTGTCCCG ATCAACATCG AAGAGGAGAT GAAATCATGC
TACATCGACT ACGCGATGAG CGTGATCATC GGCCGTGCCA TCCCCGACGC GAGAGACGGC
TTGAAGCCGG TGCACCGCCG CACCCTCTAC GCGATGTGGG AGATGGGCAA CACGAGCGAC
AAGCCCTACA AGAAGAGCGC CCGTATTGTC GGAGACGTGA TGGGTAAGTA CCATCCTCAC
GGCGATTCGG CCATCTACGA TACGCTCGTG AAGATGGCCC AGCCCTTCTC CTACCGCTGC
ATGCTGGTGG ACGGCCAGGG GAACTTCGGG TCAATCGACG GCGACTCCGC TGCCGCCATG
CGTTACACGG AGGCCCGGCT CACGAAGATC TCGGAGGAAC TGCTCACCGA TATCGACAAG
AAGACGGTGG ATTTCGTCCC GAACTTCGAC GAATCGCTCC AGGAGCCCAG TGTCCTCCCC
GCCCGGATCC CGAACCTCCT CGTCAACGGG TCGAGCGGGA TTGCCGTCGG CATGGCGACG
AACATGCCGC CCCACAACCT CAGAGAGGTC TGCGAGGCGA CCTGCCGCGT TATCGACGAC
GCGGGCACCT CCACGGAGGA GCTGATGCAG GTCATGCCCG GACCGGACTT CCCGACCGGC
GGGATCATGA TGGGCACCGC AGGCATCCGC GACGCCTATC TGACCGGTCG CGGAAAGTGC
GTTGTCAGGG GCGTCGCGGA GATCGAGGAA GAGGGCCGGA CACCGCAGAT CATCATAACC
GAGATCCCCT TCCAGGTGAA CAAGGCGCGC CTGATCGAGC ATATCGCCTC CCTCGTCCGC
GATAAAAGGA TTGAGGGGAT CGGCGATATC CGCGACGAGT CCGACCGCGA CGGCATGCGG
ATCGTGGTCG AACTCAAGAG GGGAGCCGCG CCTCAGGTGA TACTGAACTT CCTCTATAAG
CACACGGCGC TCGAGTCTTC CTTCGGCATC ATCAACCTCG CGATCGTCGA CCGCCAGCCC
CGGACCCTGA ACCTCAAGGA GATCATCCAC GAGTTCCTCA AGCACCGGGT GGACGTGGTC
CGGCGGAGGA CCGAGTTCGA TCTCACGAAG AACGAGGAAC GGATGCACAT CCTCCGCGGC
CTCCTCGTCG CGCTCGACAA CATCGACGCG GTCATCGCGA CCATCCGGGG TTCCGGGACG
ACCGATGAGG CGCAGAAGGC CCTGGTGGCA AAGTTTGCGC TGGACGAGGT GCAGGCGGAC
GCCATCTTGA AGATGCAACT CCGGAGGCTT GCGGCGCTCG AACACCAGAA GATTCTCGAC
GAGCGCGATG CAATTGCGGC GGAGATCGAG CGGTTGTCCG CGATCCTCGC AAGCGAGGCG
AGCATTCTCG CCGAGATCAA GAAGGAACTC GTCGATATCG GTGCGCGCTT CGGCGACGAA
CGGAGAACCC GGATTGCGCA GGCAGCCGAG GCGTTCGACA GGGAGGACCT CATCGAGGAC
AAACCGGTGC TGGTCTCGCT CACTTCCTCG AATTACGTGA AGAGGATCGA CCTCGACACC
TACCGGAACC AGCGGCGCGG CGGTCACGGC GTCATCGGGA TGGCGACGAA AGACAACGAC
GGCGTCGAGA AGGTCTTCGT CGCGAACATG CACGACAACC TCCTCTGCTT CACCGACAGG
GGAAGGATGT ACTGGCTGAA GATCTACGAT CTTCCCGAGG GGCAGCGGAC GGGCAAGGGC
AAGGCCCTCG TCAACCTCTT AAACCTCGAC GGCGAAGAGC GCGTGACCAC GGTGATCCCG
GTCAGGGAGT ACCGGCCCGA CCATCACCTC TTCTTTGCGA CGAGGAACGG GACGGTCGCG
AAGATGGCGC TCGACGAGTT CTCGAGGCCG CGGCAGACCG GGATCAATGC CATCAACCTC
CGCGACGGCG ATGCGCTGGT GGACGTGAAG GCGACCGACG GCAACCAGGA GTTGATCCTG
ACGACGAAGT TCGGACAGAG CCTCCGGTTC CACGAGGAAG CCGTCCGCCC GGTTCACCGG
AACGCCATGG GCGTGCGGGG GATCAAGCTC CGCCACGGCG ACGCGCTGCA GGCCATAGCC
ATCGTCGAGG ACGACCATCT CCTCACCATC ACGGAGCAGG GCTACGGGAA GCGGACGGAG
TTCGACGAGT ACCGCGGCCA CGGCAGGGGC ACGCTCGGGG TGCGAAACAT CGTCGTCGAC
GCCCGGGCGG GTAACGTCGT CGGGTCGATG GCGGTCTCCG ACGACGACGA GATCATCGTG
ATGAGTGCGT CCGGCATCGT GATCCGGACG AAGGTTTCCG AGATCTCGAT CCAGAAGCGG
GGCACCCGCG GTGTCCGGGT CATGAAACTC GACGACGGCG ACCGGGTCAT CGGGTTCACG
ATCCTGGATT CCGAGGAGCC CGAGGAAGAG GCGTAA
|
|---|
| Protein sequence | MTSEGEGVVP INIEEEMKSC YIDYAMSVII GRAIPDARDG LKPVHRRTLY AMWEMGNTSD
KPYKKSARIV GDVMGKYHPH GDSAIYDTLV KMAQPFSYRC MLVDGQGNFG SIDGDSAAAM
RYTEARLTKI SEELLTDIDK KTVDFVPNFD ESLQEPSVLP ARIPNLLVNG SSGIAVGMAT
NMPPHNLREV CEATCRVIDD AGTSTEELMQ VMPGPDFPTG GIMMGTAGIR DAYLTGRGKC
VVRGVAEIEE EGRTPQIIIT EIPFQVNKAR LIEHIASLVR DKRIEGIGDI RDESDRDGMR
IVVELKRGAA PQVILNFLYK HTALESSFGI INLAIVDRQP RTLNLKEIIH EFLKHRVDVV
RRRTEFDLTK NEERMHILRG LLVALDNIDA VIATIRGSGT TDEAQKALVA KFALDEVQAD
AILKMQLRRL AALEHQKILD ERDAIAAEIE RLSAILASEA SILAEIKKEL VDIGARFGDE
RRTRIAQAAE AFDREDLIED KPVLVSLTSS NYVKRIDLDT YRNQRRGGHG VIGMATKDND
GVEKVFVANM HDNLLCFTDR GRMYWLKIYD LPEGQRTGKG KALVNLLNLD GEERVTTVIP
VREYRPDHHL FFATRNGTVA KMALDEFSRP RQTGINAINL RDGDALVDVK ATDGNQELIL
TTKFGQSLRF HEEAVRPVHR NAMGVRGIKL RHGDALQAIA IVEDDHLLTI TEQGYGKRTE
FDEYRGHGRG TLGVRNIVVD ARAGNVVGSM AVSDDDEIIV MSASGIVIRT KVSEISIQKR
GTRGVRVMKL DDGDRVIGFT ILDSEEPEEE A
|
|---|
| |