Gene Memar_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1397 
Symbol 
ID4846345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp1389296 
End bp1389928 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID640116087 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001047308 
Protein GI126179343 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA CCTCCCTGCG GCCGAAATTC ATCAAATATA CGGAGCCAAT CGCGTCGTTT 
TTTATACGCC TGGGCGTTAC GCCGAATCAG GTCTCGGTAC TCTCGGTGCT CTTCGGTTTT 
TCGTGCGCGC TTGCCTTCGC CGGGCGCCAC TTCCTCGCGG GCAGCCTGCT CCTGTTCGTC 
TCGGCGATCC TCGACCTGGT GGACGGCAAC GTCGCCCGGA AAAATCACGC CGAGAGCCGG 
TTTGGGGCGG TCTTCGACTG GATCGCCGAC AAATACGTCG ACGCGGCGGT CATCCTCGGC 
GTGGGGTTCT CCGGCATCCC CATCGTCAGC CACCTCGTCG ACGTCCCGCC GGTCGCCGAC 
TTCGGTATCG TGGGGCTGGC GCTCGCGGGA TCGCTGATGA ACACATTCAT CAAGCCGGTC 
ACGTACGCGG AGATCGGGTA TTCCGAGAGG GTTGCCGGGA AGATCGAGGA TCCCCTCGAG 
GGGGTCGGCT TCTTCGGCAG GCCCGAGACG ATCCTCGTGC TGGTGCTCGG CGGCGTGACC 
GGGCTCCTCT GGGTTGCGGT CCTCCTCATC GCGGTCTGCA CGAACCTCTC CGCGGTCCAG 
CGGGTCTTCT ACCTCTACCG GCGGTATTCC TGA
 
Protein sequence
MNITSLRPKF IKYTEPIASF FIRLGVTPNQ VSVLSVLFGF SCALAFAGRH FLAGSLLLFV 
SAILDLVDGN VARKNHAESR FGAVFDWIAD KYVDAAVILG VGFSGIPIVS HLVDVPPVAD 
FGIVGLALAG SLMNTFIKPV TYAEIGYSER VAGKIEDPLE GVGFFGRPET ILVLVLGGVT 
GLLWVAVLLI AVCTNLSAVQ RVFYLYRRYS