Gene Memar_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1387 
Symbol 
ID4846920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1380708 
End bp1381088 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content52% 
IMG OID640116077 
Producttranscriptional regulator, TrmB 
Protein accessionYP_001047298 
Protein GI126179333 
COG category[K] Transcription 
COG ID[COG4738] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTCCG ATAAGGTACG GTATTTTACG CCACGCGATG AAGAACTCGC CGAGCTCCTG 
ATGGGTATCG GAATCAAACG AAACGTCTCC AAAGTGCTCG TATACCTGGC AAATATCGAG
GAAGCGACAT CCCGGGACAT CGAGCGCGGC ACCGATCTCC GCCAGCCCGA AGTCAGCATC
GCCATGCGCT ACCTCAAAGA ATGTAACTGG ATCGATACCC GCGAGAGCAA GTCGGAGAGC
AAAGGAAGGC CGGTGAAGAT CTACACGCTC TCGCGCTCAA TAACGGAGAT CATGGATACA
ATCGAGAAAG AAAAGAAGAA GGAAGCCCGG CATCAGTTAG ACCTCATCCA GAAGATGCGG
GAATGCATCT CAATGCAGTG A
 
Protein sequence
MRSDKVRYFT PRDEELAELL MGIGIKRNVS KVLVYLANIE EATSRDIERG TDLRQPEVSI 
AMRYLKECNW IDTRESKSES KGRPVKIYTL SRSITEIMDT IEKEKKKEAR HQLDLIQKMR
ECISMQ