| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1376 |
|---|
| Symbol | |
|---|
| ID | 4848077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1367467 |
|---|
| End bp | 1368438 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640116066 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047287 |
|---|
| Protein GI | 126179322 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4743] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCG AAACCACCGC AGGCCTTCTC ATCGGTTCCC TGGATCCCCG CACCATCCCG
CTGGACATAA AAGGCGTCTA TCTCTGGGCC TTCCTCGCCC TTGCCGGCAT CTACGCCCCA
ATCATCAGCG AGAGCCCCCT TCGTGTGGTC TTCGTCCTGC CGTTCATCCT CTTCATCCCC
GGCTATCTCC TGACCGCGGC CCTCTTCCCG GCAAGAGGCG ACCTCGACGG GATAGAGCGC
ATCGCCCTCT CGCTCGGCCT CTCCATCGCC GCCGTGCCGC TCTTCGGCTT CGCGCTCAAC
TACACGTCCT GGGGTATCCG GCTCGACTCC ATCGCCATCA CCCTCCTGGC ATTCAGTCTC
GCCGTCGGCC TTATCGCGCA GTTCCGACGC CGAGAACTTC CAGAAGAAAG CCGTTTAACG
GTTCGTTTCG GCACGTACCT CGCCGCGATA AAGGAGGAGT TCTCCGGCGG TTCCCCGTCC
CGGTTCGACC GGGTCTTAAG CGTCGTCCTC ATTGCCGCCG TCCTCGTGGC CGTCGCGACG
ACGGTCTTCG TCATCGCGGT CCCGAAAGAG GGCGAGAAGT TCACCGAGTT CTACGTACTC
GGGCCGCGAG GAAAAGCAGC CGATTACCCG ACCGAGTTCA TGTCCGGAAC GCCGCAGACG
GTCATCATCG GGATCGGGAA CCACGAATAC CAGGATATCA CCTACACGGT GGAGACGTAT
GCCGTCGAGA GCAGATTCAA TAACGCGACG AACCAGTCGA GGATCTTCTC GGCGACGCTC
CTCGACCGTT TTTCCGTCAC GGTGCCGCAC AACCGGACCG TCGAGCAGCC CTACTCCTTC
CAGATCACGG ACCCGGATAC GAACCGGCTT GAGTTCCTCC TCTTCAAGGA GGAGCCACCC
GACAACATCC CCAAAAACAA TCTCACCGGT GCCGGCTACC GCAACCTGCA CCTCTGGCTA
CAGGTGCACT GA
|
|---|
| Protein sequence | MTAETTAGLL IGSLDPRTIP LDIKGVYLWA FLALAGIYAP IISESPLRVV FVLPFILFIP
GYLLTAALFP ARGDLDGIER IALSLGLSIA AVPLFGFALN YTSWGIRLDS IAITLLAFSL
AVGLIAQFRR RELPEESRLT VRFGTYLAAI KEEFSGGSPS RFDRVLSVVL IAAVLVAVAT
TVFVIAVPKE GEKFTEFYVL GPRGKAADYP TEFMSGTPQT VIIGIGNHEY QDITYTVETY
AVESRFNNAT NQSRIFSATL LDRFSVTVPH NRTVEQPYSF QITDPDTNRL EFLLFKEEPP
DNIPKNNLTG AGYRNLHLWL QVH
|
|---|
| |