| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1366 |
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| Symbol | |
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| ID | 4847566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1357909 |
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| End bp | 1358586 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116056 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001047277 |
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| Protein GI | 126179312 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.29205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTC TGCCAATACT TATCGAGTGG TTTCCATATC TCCTTTCCGG CGTTGCCTCT
ACCCTCGGTC TTGTCCTGGC CGCCCTCGTC CTCGGCCTCC TTCTCGGGCT GCCCATGGCG
CTCGGCCAGG TGTACGGCTC CCGGCCGGTG CGCTGGGCCG TCGGAGTCTA TGTCTGGTTC
TTCAGGGGCC TCCCCATCCT CGTCCTGCTC TTCCTCTTCT GGTTCGGCAT ATTCCCCGGG
CTCGGGCTCG GTAATCTCTC GGCGTTCGTC GTCGGAGCTG TCGTGCTGGG CCTCCGGGGA
GCGGCATACC AGTCCCAGAT CTTCCGGGGA GCCATCCAGT CGGTCGGGGA AGGGCAGATG
ATCGCAGCGC GATCGCTCGG GATGAGCAGA CTCACCGCCA TCCGTTCCGT CATCCTCCCC
CAGGCGATGC GTATCGCTCT TCCCGGATGG TCGAACGAGT ATCCCAATAT CCTGACCGAC
TCGGCGGTCT GCTACGCGAT CGGGGTCGTG GAGCTGCTCA CCATTACGTC GCGGATGGTC
ACGCAGACCA ACATAACCAT GCCTGTCTAT CTCGCCACGG CGGGGATCTT CATCATCTTA
AACTACGGGG GCCTCAAACT CCTGCACAGG CTTGAGGCGA GGATAGCAAT CCCGGGATTC
GGAACCGGAG CGATGTAG
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| Protein sequence | MDVLPILIEW FPYLLSGVAS TLGLVLAALV LGLLLGLPMA LGQVYGSRPV RWAVGVYVWF
FRGLPILVLL FLFWFGIFPG LGLGNLSAFV VGAVVLGLRG AAYQSQIFRG AIQSVGEGQM
IAARSLGMSR LTAIRSVILP QAMRIALPGW SNEYPNILTD SAVCYAIGVV ELLTITSRMV
TQTNITMPVY LATAGIFIIL NYGGLKLLHR LEARIAIPGF GTGAM
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