| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1348 |
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| Symbol | |
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| ID | 4847286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1334293 |
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| End bp | 1336959 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640116039 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001047260 |
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| Protein GI | 126179295 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCTC AGTGGGAACG CCGCAACGAT ACCGGCCTTC CGTGGAGGTG CAACTACCGT
ATCCGGGGTG CCGACGGAAG GTATCGAACC ATCGCGAGCA GGGGCATCCC GGTCAGGGAC
GCCGCGGGCA GGATCGTCCT CTGGGCGGGG GTCGACCTCG ACGTCACCGG CCGGGATGAA
TCCTGCTGGC AGACGAGGGA ACTCTGCACC CTCTCCGCGG TCGCCCGTGC GATCGAAGGC
GGCGCCGATA CCGGCGAGAT CTTCCGGGAG ACGGCCGCCC TTCTGGCCCG CGGGTTCCGC
CACCCGGGAG CGGTGTCGGT GCGGATAGAG CCCGGAACCG CCGTTTCCAG ACCCGGAAGG
ATTGTTGCCG GGATTGATAC GGGAGAACGT TCAGCCGGGC AGCTCGTGGT AGAGTATGGG
AGGGTTCCGG AGGGGGGAGA CGATCCGTTC CTGCCGCAGG AGCACGCCCT TGTCCGTGCC
GTCGCCATGA TGCTCGGGGC GGCCGTCGCG CCGGCACCCG CCGGGGCTGC ATCGTCCGGG
CACCAGTACC GCCTCCTCTT CGATCAGATG CCGGACGCCG CCCTCCTTCT TGAGATACTC
CGCGATGCCT CAGGGGGCCC TGCCGGCTTC CGGGTCGTCT GGGTCAACCG CAAAACCGCC
GAAAGCCTCG GGCGTCAGCA GGAAGAGGTC GTCGGAGAAG ACCTCGTCAC GGTCGTTCCT
TCGATCACCT CTGCAGCGCT CGACCTCTTC TACCGGGCTG CCGCAACCGG GGAGGCGGTG
CATCGCGAGG TCTCAAGTCC GGCGACCGGC ACCTGCTACG AACTGAAGGC ATACCGGCCG
CAGTACGACC GGCTCGTCGT TATCGCAGAA GACGTCACGG AACGGCGCAG GGCCGAAGAG
ATGCTGCGGG AGCAGCAGAT CGCCCTGGAT AACCGGGTAA GGGAACTTGC GACGCTTTAC
GCCGTGAGCG GCGTCGTCGA GCGGCCCGGA ACATCGGTCG AAGAGGTTCT CCGAAATGTT
GCCGTCATCC TCCCCGCCGG CTGGCGCCAC CCGGAAGATG CCGCCGCCCG GATCGTGGTC
GACGGCCGGG AATACCAGTC GGCCGGATTT GTCGAAACCC CCTGGCGGCA GGAAAGCCCG
ATCGTCGTTC AGGGGCGGAT AGTCGGAAGG GTGGAGATCT GCTACCGCCG CCCGCGGCCC
GAAGATGACG GTGTGCCGTT TCCCATCGGT GAACGCCGCC TGATCGACGC CGTCGCCGGG
AGGCTCGGCC GGGTCATCGA GCGGATGCGG GCGAACAAGG CTCTTGGGAG GAGCGAAAAG
AAGTACCGCC TTCTCTTTGA ACGGATGCTC GAGAGTTACA CCCTCTACGA GGTGGTCCGG
GACGACGCCG GGAACCCTGT CGATTACCGT ATCAGCGAGC TGAACGAAAA AGCGGCCGAG
GTATTCGGCC GCAGCCGGGA GGAACTGATC GGGCAGCGGC TCTTCGATAT CTTTCCGACG
ATTGCGAAGG GTGCCTGCGC TCTCTACGGG GCGGTCGCAG AGACCGGTCA TCCGGTTCAG
CGGCGGTTGC AGGAGCCGAG AACCGGGCGG TGGTACGACC TGCAGATCTA CCGGCCGCAG
GTCGGGATGC TGGCCGTCAC GGGGCAGGAT ATCACGGAAC AGAAGAGAGC GGAACTTGCG
TTGCGGGAGA GCGAAGAGAG GTTCCGGGGG ATCTTCGAGC AGGCAGGAAC CGGGATCGCG
CTCATCGATT CGGACGGACG GATCATGGAG GTGAACCCGG CACTCGTACG GATGTTCGGT
TACGAGGAAG ACGAACTGTA CGGTATGCGA TCGTATGACC TGATCTACCC GCCCGACCGG
GAGGGGGCCG ATTCTCTCCA CCGGCAGACT GCCCTGGGGA AGGGCATCCG CCGGGAGAAA
CGCTACCTGA CGAAGGACGG CCGGATCATC TGGGGACGGC TGACCACGTC GCTGCTTCAC
GACACCGGGG AGGGAGGTCT GGTCATCGCG ATGCTGGAGG ACATCACCGA CTGGCGGGAG
ATGCAGAACG CTCTCGCGGA GAACGAGGAG CGGTTCCGCC AGATCGCCCA GCGGAGTTTC
GATATGATCT ACACCTGCTA CCATGATCGC GGGATCACCT ACATCTCCCC GGCGGTGACC
CGCATCCTCG GCTATACTCC CGACGAGTTC ATCGGCCGCG GGTGTCACGA CTACGTCGTC
CCTTCGTCCC TCCCCGTCTG GGAGGAGGGA CGAAAGAAGA TCGCCCGGGG CGAACCGGTC
GAGGGGCTCG AGATCGAGTT CCGTCGAAAA GACGGGTCCG TGGCGTTCCT CGAACTGAAC
GAGTCTCCGA TCGTGGAAGA CGGTCGCGTG GTGGGCGTAC AGATCGTCGG CAGGGACGTC
TCGGACAGGG TGCGCTACGA GGATATGCGA CTGCAGGCGT TCTACCCGAT CGAGCAGAAT
ATCGAGCAGT TTGCAGTTCT CGCGGACCAT ATCCGGCTGC CCCTGCAGGT GATCCTCGGT
ATGGCCGATC TGGCCGACGA GGAAACGATG TCGGCAAAGA TCCGGGAGCA GGTTGAGCGG
ATCAACGCGA TCGTCAAGCA ACTTGACGAG GGCTGGGTAG AGTCCCGCGA TATCAGGGAG
TTCCTGCGGA GGAATGAACT GGTATAA
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| Protein sequence | MLAQWERRND TGLPWRCNYR IRGADGRYRT IASRGIPVRD AAGRIVLWAG VDLDVTGRDE
SCWQTRELCT LSAVARAIEG GADTGEIFRE TAALLARGFR HPGAVSVRIE PGTAVSRPGR
IVAGIDTGER SAGQLVVEYG RVPEGGDDPF LPQEHALVRA VAMMLGAAVA PAPAGAASSG
HQYRLLFDQM PDAALLLEIL RDASGGPAGF RVVWVNRKTA ESLGRQQEEV VGEDLVTVVP
SITSAALDLF YRAAATGEAV HREVSSPATG TCYELKAYRP QYDRLVVIAE DVTERRRAEE
MLREQQIALD NRVRELATLY AVSGVVERPG TSVEEVLRNV AVILPAGWRH PEDAAARIVV
DGREYQSAGF VETPWRQESP IVVQGRIVGR VEICYRRPRP EDDGVPFPIG ERRLIDAVAG
RLGRVIERMR ANKALGRSEK KYRLLFERML ESYTLYEVVR DDAGNPVDYR ISELNEKAAE
VFGRSREELI GQRLFDIFPT IAKGACALYG AVAETGHPVQ RRLQEPRTGR WYDLQIYRPQ
VGMLAVTGQD ITEQKRAELA LRESEERFRG IFEQAGTGIA LIDSDGRIME VNPALVRMFG
YEEDELYGMR SYDLIYPPDR EGADSLHRQT ALGKGIRREK RYLTKDGRII WGRLTTSLLH
DTGEGGLVIA MLEDITDWRE MQNALAENEE RFRQIAQRSF DMIYTCYHDR GITYISPAVT
RILGYTPDEF IGRGCHDYVV PSSLPVWEEG RKKIARGEPV EGLEIEFRRK DGSVAFLELN
ESPIVEDGRV VGVQIVGRDV SDRVRYEDMR LQAFYPIEQN IEQFAVLADH IRLPLQVILG
MADLADEETM SAKIREQVER INAIVKQLDE GWVESRDIRE FLRRNELV
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