Gene Memar_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1342 
Symbol 
ID4846257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1328119 
End bp1329024 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content63% 
IMG OID640116033 
ProductABC transporter-related protein 
Protein accessionYP_001047254 
Protein GI126179289 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.240118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGAA CGGAGAACCT CACGAAGGTA TATAATGGAA AAACAGCCGT CGACGGCCTG 
GACCTCGTGG TCGGGGAAGG CGAGATATTC GGTTTCCTCG GCCCGAACGG AGCGGGAAAG
AGCACGACGA TCCTGATGCT CACCGGTATG ATCGAGCCCA CCGGCGGACG GTGCTTCGTC
GACGGGATCG AGGTCGCAAA AGACCCGCTG AACGTGAAGA AGATCATCGG CTACCTCCCC
GAAGACGTCG GGTTCTACGG GAACATGACC GGCGAGCAGA ACCTGGATTA TTTCGCACGG
TTCTACGGGA TGGACGCGAA GGAGAGAAAG GAGCGGATCG CAGAACTGCT CGAACTCGTC
CATCTCGACG GCGTCGCCCA GAAGGCAGGA GAGTACTCCC GCGGCATGAA GCAGCGGCTC
GGGCTCGCCC AGGCGCTGAT CAACGATCCT AAAGTGCTCT TCCTCGACGA ACCGACGGCA
AACCTCGACC CCGAGGGCGT CCGGGAGTAC CGGGAACTCG TCACCCACCT CGCCGGCGAA
GGGAAGACGA TCTTCGTCTC CTCCCACATC CTCTCCGAGG TCCGGGAGGT CTGCCGGACG
GTGGGGCTCC TCGCGAAAGG AAAACTTGCC GCGCAGGGGA CGCTCGAAGA GGTCGCCCGG
GCGCTGGCAC CTGCAGACGG CGATGCCGTC CGGATCGTCG TCGAGACCAG GGAGCGCCTG
CCGGCGATCG ACGACCCCGC GGTCATCGAT ATCGAGAGGA ACGGAAACCG TGCGGTCGTC
CGGGCGAAGG CCGATATCCG GGACCGGCTC TCCGCGACTC TCTTCGAGCA GGGGCTGCAC
GTCCGGGAGA TGCGTCTTGA GGAGCCTGAG ATAGAGGACG TCTTCATGGC GGCCTACCGG
AGGTAG
 
Protein sequence
MIRTENLTKV YNGKTAVDGL DLVVGEGEIF GFLGPNGAGK STTILMLTGM IEPTGGRCFV 
DGIEVAKDPL NVKKIIGYLP EDVGFYGNMT GEQNLDYFAR FYGMDAKERK ERIAELLELV
HLDGVAQKAG EYSRGMKQRL GLAQALINDP KVLFLDEPTA NLDPEGVREY RELVTHLAGE
GKTIFVSSHI LSEVREVCRT VGLLAKGKLA AQGTLEEVAR ALAPADGDAV RIVVETRERL
PAIDDPAVID IERNGNRAVV RAKADIRDRL SATLFEQGLH VREMRLEEPE IEDVFMAAYR
R