Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1342 |
Symbol | |
ID | 4846257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1328119 |
End bp | 1329024 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640116033 |
Product | ABC transporter-related protein |
Protein accession | YP_001047254 |
Protein GI | 126179289 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.240118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACGAA CGGAGAACCT CACGAAGGTA TATAATGGAA AAACAGCCGT CGACGGCCTG GACCTCGTGG TCGGGGAAGG CGAGATATTC GGTTTCCTCG GCCCGAACGG AGCGGGAAAG AGCACGACGA TCCTGATGCT CACCGGTATG ATCGAGCCCA CCGGCGGACG GTGCTTCGTC GACGGGATCG AGGTCGCAAA AGACCCGCTG AACGTGAAGA AGATCATCGG CTACCTCCCC GAAGACGTCG GGTTCTACGG GAACATGACC GGCGAGCAGA ACCTGGATTA TTTCGCACGG TTCTACGGGA TGGACGCGAA GGAGAGAAAG GAGCGGATCG CAGAACTGCT CGAACTCGTC CATCTCGACG GCGTCGCCCA GAAGGCAGGA GAGTACTCCC GCGGCATGAA GCAGCGGCTC GGGCTCGCCC AGGCGCTGAT CAACGATCCT AAAGTGCTCT TCCTCGACGA ACCGACGGCA AACCTCGACC CCGAGGGCGT CCGGGAGTAC CGGGAACTCG TCACCCACCT CGCCGGCGAA GGGAAGACGA TCTTCGTCTC CTCCCACATC CTCTCCGAGG TCCGGGAGGT CTGCCGGACG GTGGGGCTCC TCGCGAAAGG AAAACTTGCC GCGCAGGGGA CGCTCGAAGA GGTCGCCCGG GCGCTGGCAC CTGCAGACGG CGATGCCGTC CGGATCGTCG TCGAGACCAG GGAGCGCCTG CCGGCGATCG ACGACCCCGC GGTCATCGAT ATCGAGAGGA ACGGAAACCG TGCGGTCGTC CGGGCGAAGG CCGATATCCG GGACCGGCTC TCCGCGACTC TCTTCGAGCA GGGGCTGCAC GTCCGGGAGA TGCGTCTTGA GGAGCCTGAG ATAGAGGACG TCTTCATGGC GGCCTACCGG AGGTAG
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Protein sequence | MIRTENLTKV YNGKTAVDGL DLVVGEGEIF GFLGPNGAGK STTILMLTGM IEPTGGRCFV DGIEVAKDPL NVKKIIGYLP EDVGFYGNMT GEQNLDYFAR FYGMDAKERK ERIAELLELV HLDGVAQKAG EYSRGMKQRL GLAQALINDP KVLFLDEPTA NLDPEGVREY RELVTHLAGE GKTIFVSSHI LSEVREVCRT VGLLAKGKLA AQGTLEEVAR ALAPADGDAV RIVVETRERL PAIDDPAVID IERNGNRAVV RAKADIRDRL SATLFEQGLH VREMRLEEPE IEDVFMAAYR R
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