Gene Memar_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1336 
Symbol 
ID4847444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1319824 
End bp1320558 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID640116027 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001047248 
Protein GI126179283 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACGG ATCGGGAACG GGAACGTTAT CGGCGGCAGG TCGCGCTCTT CGGAGAGGAG 
GCGCAGGAAC GGCTCGCGAA TGCTCGGGTC GTCATTGTCG GGGCCGGCGG TCTCGGCTGT
CCCGTCGCCC TCTACCTTGC TGCCGCCGGT ATCGGTGAGA TCCGGCTGGT CGACGGCGAC
GTCGTGGACC GGACCAACCT GAACCGACAG GTGCTTCATA CCGAACGCGA CGTCGGACGG
GCGAAGGTCG AGTCGGCGGC CGAGAAGATC CGGGCGCAGA ACCCGGAGAT CGCGGTCGCC
GCCACCCGGG CAACCCTCGA TGAAGGAAAC GCCGCCCGAC TCGCGGGCGG GGCCGACCTC
ATCGTCGACG CCACCGATAA TTTCGCGGCG CGCTACATCC TCAACCGGGT GGCGCTCCGG
AACAGCGTGC CGCTCGTCCA CGGGGCGGTC AGGGGATTCG ACGGACAGGC GACGACGATC
ATCCCCGGGA AGACGGCCTG CCTCGAGTGC ATATTCCCGG TAGCCCCGCC CGGGGAGGAT
GTCATCCCCG TTGTCGGCAC CACGCCCGGG ATCATCGGGC TCGTCCAGGC GAACGAGGCG
ATCAAGTACA TCACCGGCAC CGGCGATCTC CTGGCCGGCC GGCTCCTCGT CTGGGACGGG
CGGGCCGCCA CGACGGCGAT CCTGCCCGTG GAGCGGCAGG ATGACTGCAG AGCGTGTGGA
AACGGCAGGT GTTGA
 
Protein sequence
MLTDRERERY RRQVALFGEE AQERLANARV VIVGAGGLGC PVALYLAAAG IGEIRLVDGD 
VVDRTNLNRQ VLHTERDVGR AKVESAAEKI RAQNPEIAVA ATRATLDEGN AARLAGGADL
IVDATDNFAA RYILNRVALR NSVPLVHGAV RGFDGQATTI IPGKTACLEC IFPVAPPGED
VIPVVGTTPG IIGLVQANEA IKYITGTGDL LAGRLLVWDG RAATTAILPV ERQDDCRACG
NGRC