Gene Memar_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1323 
Symbol 
ID4846926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1310939 
End bp1311388 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID640116014 
Productrubrerythrin 
Protein accessionYP_001047235 
Protein GI126179270 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.116816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCCG AAGACTTCCA GAAGATCATC ACGAACGCCA TCGACAGCGA AGTAGAGTCG 
TACACCTTCT ACAGGTCGGT CGCCGACAGG GTGAAGGATG CAAACCTGAA GACGCTCTTC
CTCGACCTTG CCGAGGACGA GAAGGGCCAC CGGGAGTACC TCCAGGGTCT GCTGCTCCGC
GATGTAAATC AGATGCACTT TGTCGCGGCT AGGGACTACA AGATCACCGA CTCCATCGAA
GAGCCCGAGC TCTCGGTCGA TATGAAGCCG CTCGACGGCC TGGTCCTTGC CATCAAGAAG
GAACTCCAGG CTGCCCAGAT GTACACACAG CTTGCCTCCG CGGATGCAGA GCAGCAGACG
GTCTTTGTCC AGCTCGCAAA TATGGAGAAG GGGCACAAGG CCCGGCTCGA AGACATCTAC
ACCAACATGG CATACCCTGA GGCGTGGTAA
 
Protein sequence
MNSEDFQKII TNAIDSEVES YTFYRSVADR VKDANLKTLF LDLAEDEKGH REYLQGLLLR 
DVNQMHFVAA RDYKITDSIE EPELSVDMKP LDGLVLAIKK ELQAAQMYTQ LASADAEQQT
VFVQLANMEK GHKARLEDIY TNMAYPEAW